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Cluster: HRGMv2_0329_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0329_22 HRGMv2_0329_22_24 20690 22363 + 3.A.1.121.4
NULL(UNKNOWN) HRGMv2_0329_22 HRGMv2_0329_22_25 22407 22511 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0329_22 HRGMv2_0329_22_26 22555 24090 - GH128
CAZyme HRGMv2_0329_22 HRGMv2_0329_22_27 24105 26330 - GH3
CAZyme HRGMv2_0329_22 HRGMv2_0329_22_28 26349 27236 - GH16_3
CAZyme HRGMv2_0329_22 HRGMv2_0329_22_29 27236 28405 - GH16_3
NULL(UNKNOWN) HRGMv2_0329_22 HRGMv2_0329_22_30 28556 29518 - NULL(UNKNOWN)
[View Structural Homologs]
sulfatase HRGMv2_0329_22 HRGMv2_0329_22_31 29605 31218 - S1_27
TC HRGMv2_0329_22 HRGMv2_0329_22_32 31239 34358 - 1.B.14.6.1
Gene ID: HRGMv2_0329_22_24
Type: TC
Location: 20690 - 22363 (+)
Gene ID: HRGMv2_0329_22_25
Type:
Location: 22407 - 22511 (-)
Gene ID: HRGMv2_0329_22_26
Type: CAZyme
Location: 22555 - 24090 (-)
Gene ID: HRGMv2_0329_22_27
Type: CAZyme
Location: 24105 - 26330 (-)
Gene ID: HRGMv2_0329_22_28
Type: CAZyme
Location: 26349 - 27236 (-)
Gene ID: HRGMv2_0329_22_29
Type: CAZyme
Location: 27236 - 28405 (-)
Gene ID: HRGMv2_0329_22_30
Type:
Location: 28556 - 29518 (-)
Gene ID: HRGMv2_0329_22_31
Type: sulfatase
Location: 29605 - 31218 (-)
Gene ID: HRGMv2_0329_22_32
Type: TC
Location: 31239 - 34358 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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