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Cluster: HRGMv2_0329_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0329_15 HRGMv2_0329_15_42 56180 57760 + 3.A.2.1.3
TC HRGMv2_0329_15 HRGMv2_0329_15_43 57771 58643 + 3.A.2.1.1
STP HRGMv2_0329_15 HRGMv2_0329_15_44 58751 59251 + Fer4 | Fer4
TC HRGMv2_0329_15 HRGMv2_0329_15_45 59269 59787 + 3.D.9.1.1
TC HRGMv2_0329_15 HRGMv2_0329_15_46 59797 60108 + 3.D.1.2.1
TC HRGMv2_0329_15 HRGMv2_0329_15_47 60114 62033 + 3.D.9.1.1
TC HRGMv2_0329_15 HRGMv2_0329_15_48 62060 63580 + 3.D.1.2.1
TC HRGMv2_0329_15 HRGMv2_0329_15_49 63616 65070 + 3.D.1.8.1
NULL(UNKNOWN) HRGMv2_0329_15 HRGMv2_0329_15_50 65283 65840 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0329_15 HRGMv2_0329_15_51 66162 68831 + CE1 | GH13_46
Gene ID: HRGMv2_0329_15_42
Type: TC
Location: 56180 - 57760 (+)
Gene ID: HRGMv2_0329_15_43
Type: TC
Location: 57771 - 58643 (+)
Gene ID: HRGMv2_0329_15_44
Type: STP
Location: 58751 - 59251 (+)
Gene ID: HRGMv2_0329_15_45
Type: TC
Location: 59269 - 59787 (+)
Gene ID: HRGMv2_0329_15_46
Type: TC
Location: 59797 - 60108 (+)
Gene ID: HRGMv2_0329_15_47
Type: TC
Location: 60114 - 62033 (+)
Gene ID: HRGMv2_0329_15_48
Type: TC
Location: 62060 - 63580 (+)
Gene ID: HRGMv2_0329_15_49
Type: TC
Location: 63616 - 65070 (+)
Gene ID: HRGMv2_0329_15_50
Type:
Location: 65283 - 65840 (+)
Gene ID: HRGMv2_0329_15_51
Type: CAZyme
Location: 66162 - 68831 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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