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Cluster: HRGMv2_0329_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0329_11 HRGMv2_0329_11_28 41950 44505 + GH18
NULL(UNKNOWN) HRGMv2_0329_11 HRGMv2_0329_11_29 44607 45203 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0329_11 HRGMv2_0329_11_30 45218 48445 + 1.B.14.6.1
pfam HRGMv2_0329_11 HRGMv2_0329_11_31 48469 50382 + SusD_RagB | SusD-like_3
sulfatase HRGMv2_0329_11 HRGMv2_0329_11_32 50483 52057 + S1_11
CAZyme HRGMv2_0329_11 HRGMv2_0329_11_33 52065 54374 + GH20
CAZyme HRGMv2_0329_11 HRGMv2_0329_11_34 54479 57571 + GH2
CAZyme HRGMv2_0329_11 HRGMv2_0329_11_35 57583 59475 + CBM32 | GH29
CAZyme HRGMv2_0329_11 HRGMv2_0329_11_36 59491 61932 + GH2
Gene ID: HRGMv2_0329_11_28
Type: CAZyme
Location: 41950 - 44505 (+)
Gene ID: HRGMv2_0329_11_29
Type:
Location: 44607 - 45203 (+)
Gene ID: HRGMv2_0329_11_30
Type: TC
Location: 45218 - 48445 (+)
Gene ID: HRGMv2_0329_11_31
Type: pfam
Location: 48469 - 50382 (+)
Gene ID: HRGMv2_0329_11_32
Type: sulfatase
Location: 50483 - 52057 (+)
Gene ID: HRGMv2_0329_11_33
Type: CAZyme
Location: 52065 - 54374 (+)
Gene ID: HRGMv2_0329_11_34
Type: CAZyme
Location: 54479 - 57571 (+)
Gene ID: HRGMv2_0329_11_35
Type: CAZyme
Location: 57583 - 59475 (+)
Gene ID: HRGMv2_0329_11_36
Type: CAZyme
Location: 59491 - 61932 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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