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Cluster: HRGMv2_0329_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0329_8 HRGMv2_0329_8_28 37429 38721 + 2.A.1.7.2
pfam HRGMv2_0329_8 HRGMv2_0329_8_29 38875 40917 + Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1
CAZyme HRGMv2_0329_8 HRGMv2_0329_8_30 41150 42535 - GH57
CAZyme HRGMv2_0329_8 HRGMv2_0329_8_31 42548 43795 - GT4
CAZyme HRGMv2_0329_8 HRGMv2_0329_8_32 43831 45774 - GH133
pfam HRGMv2_0329_8 HRGMv2_0329_8_33 45913 46884 - DAGK_cat | YegS_C
pfam HRGMv2_0329_8 HRGMv2_0329_8_34 47010 47612 + DUF308
TC HRGMv2_0329_8 HRGMv2_0329_8_35 47692 48321 - 2.A.115.2.14
Gene ID: HRGMv2_0329_8_28
Type: TC
Location: 37429 - 38721 (+)
Gene ID: HRGMv2_0329_8_29
Type: pfam
Location: 38875 - 40917 (+)
Gene ID: HRGMv2_0329_8_30
Type: CAZyme
Location: 41150 - 42535 (-)
Gene ID: HRGMv2_0329_8_31
Type: CAZyme
Location: 42548 - 43795 (-)
Gene ID: HRGMv2_0329_8_32
Type: CAZyme
Location: 43831 - 45774 (-)
Gene ID: HRGMv2_0329_8_33
Type: pfam
Location: 45913 - 46884 (-)
Gene ID: HRGMv2_0329_8_34
Type: pfam
Location: 47010 - 47612 (+)
Gene ID: HRGMv2_0329_8_35
Type: TC
Location: 47692 - 48321 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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