Cluster: HRGMv2_0329_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0329
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0329_7 | HRGMv2_0329_7_61 | 71938 | 73125 | + | GT4 |
| pfam | HRGMv2_0329_7 | HRGMv2_0329_7_62 | 73216 | 74280 | + | Radical_SAM | SPASM |
| CAZyme | HRGMv2_0329_7 | HRGMv2_0329_7_63 | 74284 | 75378 | + | GT4 |
| pfam | HRGMv2_0329_7 | HRGMv2_0329_7_64 | 75456 | 76838 | + | MurJ |
| TC | HRGMv2_0329_7 | HRGMv2_0329_7_65 | 77089 | 78057 | + | 2.A.19.5.2 |
| pfam | HRGMv2_0329_7 | HRGMv2_0329_7_66 | 78147 | 79250 | - | MMR_HSR1 | FeoB_N | YchF-GTPase_C |
| TC | HRGMv2_0329_7 | HRGMv2_0329_7_67 | 79415 | 80407 | - | 2.A.4.7.7 |
Gene ID: HRGMv2_0329_7_61
Type: CAZyme
Location: 71938 - 73125 (+)
Type: CAZyme
Location: 71938 - 73125 (+)
Gene ID: HRGMv2_0329_7_62
Type: pfam
Location: 73216 - 74280 (+)
Type: pfam
Location: 73216 - 74280 (+)
Gene ID: HRGMv2_0329_7_63
Type: CAZyme
Location: 74284 - 75378 (+)
Type: CAZyme
Location: 74284 - 75378 (+)
Gene ID: HRGMv2_0329_7_64
Type: pfam
Location: 75456 - 76838 (+)
Type: pfam
Location: 75456 - 76838 (+)
Gene ID: HRGMv2_0329_7_65
Type: TC
Location: 77089 - 78057 (+)
Type: TC
Location: 77089 - 78057 (+)
Gene ID: HRGMv2_0329_7_66
Type: pfam
Location: 78147 - 79250 (-)
Type: pfam
Location: 78147 - 79250 (-)
Gene ID: HRGMv2_0329_7_67
Type: TC
Location: 79415 - 80407 (-)
Type: TC
Location: 79415 - 80407 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma sp900544305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.