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Cluster: HRGMv2_0329_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0329_6 HRGMv2_0329_6_50 63608 65605 - 3.A.6.1.1
pfam HRGMv2_0329_6 HRGMv2_0329_6_51 65828 66409 - DUF3109
pfam HRGMv2_0329_6 HRGMv2_0329_6_52 66712 73554 + Laminin_G_3 | Laminin_G_3
CAZyme HRGMv2_0329_6 HRGMv2_0329_6_53 73581 76466 + CBM51 | CBM51
peptidase HRGMv2_0329_6 HRGMv2_0329_6_54 76494 78755 + I39.UPW
TC HRGMv2_0329_6 HRGMv2_0329_6_55 79121 80518 + 2.A.62.1.3
Gene ID: HRGMv2_0329_6_50
Type: TC
Location: 63608 - 65605 (-)
Gene ID: HRGMv2_0329_6_51
Type: pfam
Location: 65828 - 66409 (-)
Gene ID: HRGMv2_0329_6_52
Type: pfam
Location: 66712 - 73554 (+)
Gene ID: HRGMv2_0329_6_53
Type: CAZyme
Location: 73581 - 76466 (+)
Gene ID: HRGMv2_0329_6_54
Type: peptidase
Location: 76494 - 78755 (+)
Gene ID: HRGMv2_0329_6_55
Type: TC
Location: 79121 - 80518 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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