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Cluster: HRGMv2_0328_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0328_16 HRGMv2_0328_16_20 18372 19001 - 9.B.18.1.1
CAZyme HRGMv2_0328_16 HRGMv2_0328_16_21 18994 20184 - GT4
pfam HRGMv2_0328_16 HRGMv2_0328_16_22 20192 21325 - Epimerase_2
pfam HRGMv2_0328_16 HRGMv2_0328_16_23 21336 22469 - Epimerase | Polysacc_synt_C
TC HRGMv2_0328_16 HRGMv2_0328_16_24 22581 23597 - 9.B.18.2.1
CAZyme HRGMv2_0328_16 HRGMv2_0328_16_25 23613 24692 - GT4
pfam HRGMv2_0328_16 HRGMv2_0328_16_26 24673 25902 - Glycos_transf_1 | Glyco_trans_1_4
NULL(UNKNOWN) HRGMv2_0328_16 HRGMv2_0328_16_27 25902 27170 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0328_16 HRGMv2_0328_16_28 27145 28422 - GT4
Gene ID: HRGMv2_0328_16_20
Type: TC
Location: 18372 - 19001 (-)
Gene ID: HRGMv2_0328_16_21
Type: CAZyme
Location: 18994 - 20184 (-)
Gene ID: HRGMv2_0328_16_22
Type: pfam
Location: 20192 - 21325 (-)
Gene ID: HRGMv2_0328_16_23
Type: pfam
Location: 21336 - 22469 (-)
Gene ID: HRGMv2_0328_16_24
Type: TC
Location: 22581 - 23597 (-)
Gene ID: HRGMv2_0328_16_25
Type: CAZyme
Location: 23613 - 24692 (-)
Gene ID: HRGMv2_0328_16_26
Type: pfam
Location: 24673 - 25902 (-)
Gene ID: HRGMv2_0328_16_27
Type:
Location: 25902 - 27170 (-)
Gene ID: HRGMv2_0328_16_28
Type: CAZyme
Location: 27145 - 28422 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Marinifilaceae
→
Genus
Odoribacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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