PROTEIN: HRGMv2_0328_16_27
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Protein File & Metadata
Source:
HRGMv2_0328_16_27.pdb
Genome ID:
Protein ID:
HRGMv2_0328_16_27
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Protein Sequence
MQQMPAVCRT NRLLTLSRMR CKLILPRGGW VIFLTALMLL NYAGIGHYFG LFLIPVLLYT 60 KGITRYFTWE AVSLLLFSLT YTAFLVIYKG ITGLGVGTLL LYLWIPLVGY QAGFYLMRVN 120 VSGDTVFKIL YLLMIACALL VMASVFIEIR KNGFVGGGGR NLPLIGGDDT IVSATGLGAR 180 LSVLLAFLGI PLGTGYTAGQ RRWSLLLFAG AVVCLIFTVR LGTRTGIVIA LFSAVTLLIY 240 NFRHYSAGGR IGLLLLLGIV GIGIMNFIEK NGELLLFYMD RMGNETAGIA TGGGRTELWA 300 YYGSKILSYP FGNMPDHPFL NEYAHNLWID VARRTGIIPL AFLLAFFFST WRNIYRFIRF 360 SAADRFLKNV VLVVTVAFML QFSVEPVLEG MFMLFVLYCL FCGMIKRYLQ TDNCICRSKA 420 VY 422
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P26471-F1-model_v4 | 13 | 414 | 4 | 404 | 0.7018 |
0.7462 |
| AF-Q9HUG6-F1-model_v4 | 17 | 422 | 9 | 400 | 0.7015 |
0.7581 |
| AF-Q8CYC1-F1-model_v4 | 22 | 415 | 11 | 394 | 0.6986 |
0.7651 |
| AF-P44067-F1-model_v4 | 18 | 408 | 1 | 399 | 0.6985 |
0.7559 |
| AF-Q2G288-F1-model_v4 | 17 | 421 | 2 | 412 | 0.6811 |
0.7268 |
| AF-A0A286V175-F1-model_v4 | 23 | 414 | 6 | 475 | 0.6532 |
0.76 |
| AF-Q5FA54-F1-model_v4 | 5 | 414 | 3 | 430 | 0.5792 |
0.7103 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-G1FG65-F1-model_v4 | GT0 | 11 | 414 | 9 | 430 | 0.5787 |
0.719 |
| AF-Q9K0K0-F1-model_v4 | GT0 | 11 | 414 | 9 | 430 | 0.5781 |
0.7182 |
| QSP96058.1 | GT2 | 14 | 422 | 1 | 514 | 0.5743 |
0.7354 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 20 | 422 | 1 | 507 | 0.5715 |
0.7381 |
| AF-A0A346S464-F1-model_v4 | GT2 | 21 | 422 | 1 | 508 | 0.5711 |
0.7404 |
| AF-A0A4V0YNK7-F1-model_v4 | GT25 | 1 | 422 | 1 | 694 | 0.5681 |
0.715 |
| AF-E4PMS8-F1-model_v4 | GT2 | 21 | 422 | 1 | 508 | 0.5666 |
0.7346 |
| UII34295.1 | GT4 | 16 | 422 | 5 | 782 | 0.5661 |
0.7655 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 26 | 422 | 1 | 503 | 0.566 |
0.7398 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 20 | 422 | 3 | 510 | 0.5657 |
0.7323 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 14 | 422 | 1 | 514 | 0.5743 |
0.7354 |
| UII34295.1 | GT4 | 16 | 422 | 5 | 782 | 0.5661 |
0.7655 |
| A0A807AJ04 | GT25 | 2 | 419 | 2 | 691 | 0.5613 |
0.713 |
| B5YD26 | GT9 | 21 | 422 | 39 | 477 | 0.5596 |
0.7642 |
| D5MJ04 | GT9 | 17 | 422 | 19 | 565 | 0.5591 |
0.7548 |
| WBY01952.1 | GT9 | 15 | 422 | 7 | 560 | 0.545 |
0.7311 |
| USX27957.1 | GT9 | 18 | 422 | 13 | 448 | 0.5443 |
0.7309 |
| A0A517MXC4 | GT26 | 21 | 422 | 18 | 454 | 0.544 |
0.7334 |
| A0A2P1NHY6 | GT4 | 20 | 419 | 22 | 447 | 0.5235 |
0.7329 |
| B5L412 | GT2 | 17 | 422 | 1 | 530 | 0.5105 |
0.6594 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7tpj-assembly1.cif.gz_B | 17 | 415 | 1 | 403 | 0.6361 |
0.6854 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P26471-F1-model_v4 | 13 | 414 | 4 | 404 | 0.7018 |
0.7462 |
| AF-Q9HUG6-F1-model_v4 | 17 | 422 | 9 | 400 | 0.7015 |
0.7581 |
| AF-P44067-F1-model_v4 | 18 | 408 | 1 | 399 | 0.6985 |
0.7559 |
| AF-O67472-F1-model_v4 | 22 | 416 | 1 | 388 | 0.6575 |
0.7114 |
| AF-Q6FFS6-F1-model_v4 | 14 | 414 | 7 | 426 | 0.6053 |
0.7398 |