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Cluster: HRGMv2_0323_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0323_1 HRGMv2_0323_1_295 355806 356933 - GH18
TC HRGMv2_0323_1 HRGMv2_0323_1_296 356961 358502 - 8.A.46.2.1
TC HRGMv2_0323_1 HRGMv2_0323_1_297 358518 361523 - 1.B.14.6.13
CAZyme HRGMv2_0323_1 HRGMv2_0323_1_298 362114 364159 - GH29
CAZyme HRGMv2_0323_1 HRGMv2_0323_1_299 364414 366741 + GH20
CAZyme HRGMv2_0323_1 HRGMv2_0323_1_300 366759 368795 + GH20
TC HRGMv2_0323_1 HRGMv2_0323_1_301 369673 372696 + 1.B.14.6.13
TC HRGMv2_0323_1 HRGMv2_0323_1_302 372711 374240 + 8.A.46.2.1
CAZyme HRGMv2_0323_1 HRGMv2_0323_1_303 374265 375371 + GH18
Gene ID: HRGMv2_0323_1_295
Type: CAZyme
Location: 355806 - 356933 (-)
Gene ID: HRGMv2_0323_1_296
Type: TC
Location: 356961 - 358502 (-)
Gene ID: HRGMv2_0323_1_297
Type: TC
Location: 358518 - 361523 (-)
Gene ID: HRGMv2_0323_1_298
Type: CAZyme
Location: 362114 - 364159 (-)
Gene ID: HRGMv2_0323_1_299
Type: CAZyme
Location: 364414 - 366741 (+)
Gene ID: HRGMv2_0323_1_300
Type: CAZyme
Location: 366759 - 368795 (+)
Gene ID: HRGMv2_0323_1_301
Type: TC
Location: 369673 - 372696 (+)
Gene ID: HRGMv2_0323_1_302
Type: TC
Location: 372711 - 374240 (+)
Gene ID: HRGMv2_0323_1_303
Type: CAZyme
Location: 374265 - 375371 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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