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Cluster: HRGMv2_0323_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0323_10 HRGMv2_0323_10_6 6884 7819 - CE1
pfam HRGMv2_0323_10 HRGMv2_0323_10_7 7876 8778 + Phage_integrase | Phage_int_SAM_1 | Phage_int_SAM_4
pfam HRGMv2_0323_10 HRGMv2_0323_10_8 8803 9099 + Ribosomal_S30AE
TC HRGMv2_0323_10 HRGMv2_0323_10_9 9342 10676 - 2.A.66.1.28
pfam HRGMv2_0323_10 HRGMv2_0323_10_10 11333 12058 + DUF3298
CAZyme HRGMv2_0323_10 HRGMv2_0323_10_11 13940 15091 - GT4
CAZyme HRGMv2_0323_10 HRGMv2_0323_10_12 15107 16216 - GT4
CAZyme HRGMv2_0323_10 HRGMv2_0323_10_13 16240 17271 - GT2
Gene ID: HRGMv2_0323_10_6
Type: CAZyme
Location: 6884 - 7819 (-)
Gene ID: HRGMv2_0323_10_7
Type: pfam
Location: 7876 - 8778 (+)
Gene ID: HRGMv2_0323_10_8
Type: pfam
Location: 8803 - 9099 (+)
Gene ID: HRGMv2_0323_10_9
Type: TC
Location: 9342 - 10676 (-)
Gene ID: HRGMv2_0323_10_10
Type: pfam
Location: 11333 - 12058 (+)
Gene ID: HRGMv2_0323_10_11
Type: CAZyme
Location: 13940 - 15091 (-)
Gene ID: HRGMv2_0323_10_12
Type: CAZyme
Location: 15107 - 16216 (-)
Gene ID: HRGMv2_0323_10_13
Type: CAZyme
Location: 16240 - 17271 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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