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Cluster: HRGMv2_0323_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0323_6 HRGMv2_0323_6_3 2519 5866 + 1.B.14.6.13
TC HRGMv2_0323_6 HRGMv2_0323_6_4 5873 7450 + 8.A.46.2.2
pfam HRGMv2_0323_6 HRGMv2_0323_6_5 7472 8512 + GH18_BT1044-like
pfam HRGMv2_0323_6 HRGMv2_0323_6_6 8519 9748 + Pentaxin | BT_3987-like_N | Laminin_G_3
CAZyme HRGMv2_0323_6 HRGMv2_0323_6_7 9779 11179 + GH18
pfam HRGMv2_0323_6 HRGMv2_0323_6_8 11256 12794 + BACON | BACON
CAZyme HRGMv2_0323_6 HRGMv2_0323_6_9 13070 14863 + GH123
TC HRGMv2_0323_6 HRGMv2_0323_6_10 15080 17755 + 1.B.14.12.3
Gene ID: HRGMv2_0323_6_3
Type: TC
Location: 2519 - 5866 (+)
Gene ID: HRGMv2_0323_6_4
Type: TC
Location: 5873 - 7450 (+)
Gene ID: HRGMv2_0323_6_5
Type: pfam
Location: 7472 - 8512 (+)
Gene ID: HRGMv2_0323_6_6
Type: pfam
Location: 8519 - 9748 (+)
Gene ID: HRGMv2_0323_6_7
Type: CAZyme
Location: 9779 - 11179 (+)
Gene ID: HRGMv2_0323_6_8
Type: pfam
Location: 11256 - 12794 (+)
Gene ID: HRGMv2_0323_6_9
Type: CAZyme
Location: 13070 - 14863 (+)
Gene ID: HRGMv2_0323_6_10
Type: TC
Location: 15080 - 17755 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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