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Cluster: HRGMv2_0323_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0323_5 HRGMv2_0323_5_124 137464 137730 + 1.E.43.1.10
NULL(UNKNOWN) HRGMv2_0323_5 HRGMv2_0323_5_125 138182 138586 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0323_5 HRGMv2_0323_5_126 138770 140107 + 2.A.62.1.3
pfam HRGMv2_0323_5 HRGMv2_0323_5_127 140243 140617 - 4HBT | FlK
pfam HRGMv2_0323_5 HRGMv2_0323_5_128 140804 141394 + DUF4294
TC HRGMv2_0323_5 HRGMv2_0323_5_129 141486 142829 + 3.A.5.1.1
pfam HRGMv2_0323_5 HRGMv2_0323_5_130 143909 144790 + GTP_EFTU | MMR_HSR1 | FeoB_N | KH_2 | PduV-EutP
STP HRGMv2_0323_5 HRGMv2_0323_5_131 145276 147213 + TPR_1 | TPR_1 | TPR_1 | TPR_1
TC HRGMv2_0323_5 HRGMv2_0323_5_132 147360 148730 + 2.A.1.53.5
CAZyme HRGMv2_0323_5 HRGMv2_0323_5_133 148871 150016 - GT4
Gene ID: HRGMv2_0323_5_124
Type: TC
Location: 137464 - 137730 (+)
Gene ID: HRGMv2_0323_5_125
Type:
Location: 138182 - 138586 (+)
Gene ID: HRGMv2_0323_5_126
Type: TC
Location: 138770 - 140107 (+)
Gene ID: HRGMv2_0323_5_127
Type: pfam
Location: 140243 - 140617 (-)
Gene ID: HRGMv2_0323_5_128
Type: pfam
Location: 140804 - 141394 (+)
Gene ID: HRGMv2_0323_5_129
Type: TC
Location: 141486 - 142829 (+)
Gene ID: HRGMv2_0323_5_130
Type: pfam
Location: 143909 - 144790 (+)
Gene ID: HRGMv2_0323_5_131
Type: STP
Location: 145276 - 147213 (+)
Gene ID: HRGMv2_0323_5_132
Type: TC
Location: 147360 - 148730 (+)
Gene ID: HRGMv2_0323_5_133
Type: CAZyme
Location: 148871 - 150016 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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