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Cluster: HRGMv2_0323_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0323_4 HRGMv2_0323_4_144 162269 163579 - 9.B.33.1.2
pfam HRGMv2_0323_4 HRGMv2_0323_4_145 163598 164131 - Hexapep | Hexapep | Hexapep_2 | Hexapep_2
pfam HRGMv2_0323_4 HRGMv2_0323_4_146 164219 164995 - PRA-PH | MazG | MazG
CAZyme HRGMv2_0323_4 HRGMv2_0323_4_147 165187 167346 + GH20
pfam HRGMv2_0323_4 HRGMv2_0323_4_148 167494 169959 - tRNA_bind | FDX-ACB | B3_4 | B5 | tRNA_synthFbeta
STP HRGMv2_0323_4 HRGMv2_0323_4_149 170487 171848 + PALP
TC HRGMv2_0323_4 HRGMv2_0323_4_150 171945 172844 - 2.A.7.3.57
pfam HRGMv2_0323_4 HRGMv2_0323_4_151 173048 174205 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
sulfatase HRGMv2_0323_4 HRGMv2_0323_4_152 174507 176297 + S1_97
TC HRGMv2_0323_4 HRGMv2_0323_4_153 176302 178209 + 4.C.1.1.14
Gene ID: HRGMv2_0323_4_144
Type: TC
Location: 162269 - 163579 (-)
Gene ID: HRGMv2_0323_4_145
Type: pfam
Location: 163598 - 164131 (-)
Gene ID: HRGMv2_0323_4_146
Type: pfam
Location: 164219 - 164995 (-)
Gene ID: HRGMv2_0323_4_147
Type: CAZyme
Location: 165187 - 167346 (+)
Gene ID: HRGMv2_0323_4_148
Type: pfam
Location: 167494 - 169959 (-)
Gene ID: HRGMv2_0323_4_149
Type: STP
Location: 170487 - 171848 (+)
Gene ID: HRGMv2_0323_4_150
Type: TC
Location: 171945 - 172844 (-)
Gene ID: HRGMv2_0323_4_151
Type: pfam
Location: 173048 - 174205 (-)
Gene ID: HRGMv2_0323_4_152
Type: sulfatase
Location: 174507 - 176297 (+)
Gene ID: HRGMv2_0323_4_153
Type: TC
Location: 176302 - 178209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0323_4_150 omnivore > vegan 1.16466 0.04111

🧭 Explore Read Mapping of CGC

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