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Cluster: HRGMv2_0323_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0323_3 HRGMv2_0323_3_2 1440 3161 - 9.B.174.1.1
pfam HRGMv2_0323_3 HRGMv2_0323_3_3 3254 4456 - DUF3078
pfam HRGMv2_0323_3 HRGMv2_0323_3_4 4531 5379 + AP_endonuc_2
TC HRGMv2_0323_3 HRGMv2_0323_3_5 5897 7378 - 2.A.6.2.11
TC HRGMv2_0323_3 HRGMv2_0323_3_6 7375 10470 - 2.A.6.2.22
TC HRGMv2_0323_3 HRGMv2_0323_3_7 10489 11769 - 2.A.6.2.29
CAZyme HRGMv2_0323_3 HRGMv2_0323_3_8 12641 14041 - GH109
Gene ID: HRGMv2_0323_3_2
Type: TC
Location: 1440 - 3161 (-)
Gene ID: HRGMv2_0323_3_3
Type: pfam
Location: 3254 - 4456 (-)
Gene ID: HRGMv2_0323_3_4
Type: pfam
Location: 4531 - 5379 (+)
Gene ID: HRGMv2_0323_3_5
Type: TC
Location: 5897 - 7378 (-)
Gene ID: HRGMv2_0323_3_6
Type: TC
Location: 7375 - 10470 (-)
Gene ID: HRGMv2_0323_3_7
Type: TC
Location: 10489 - 11769 (-)
Gene ID: HRGMv2_0323_3_8
Type: CAZyme
Location: 12641 - 14041 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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