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Cluster: HRGMv2_0321_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0321_8 HRGMv2_0321_8_3 2811 3635 + GT2
CAZyme HRGMv2_0321_8 HRGMv2_0321_8_4 3740 4603 + GT2
NULL(UNKNOWN) HRGMv2_0321_8 HRGMv2_0321_8_5 5185 5292 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0321_8 HRGMv2_0321_8_6 5486 6379 + GINT1_N
CAZyme HRGMv2_0321_8 HRGMv2_0321_8_7 6376 7431 + GT4
pfam HRGMv2_0321_8 HRGMv2_0321_8_8 7428 8546 + NTP_transf_5
TC HRGMv2_0321_8 HRGMv2_0321_8_9 8559 9728 + 9.B.146.1.4
pfam HRGMv2_0321_8 HRGMv2_0321_8_10 9776 10660 + Acyl_transf_1
CAZyme HRGMv2_0321_8 HRGMv2_0321_8_11 10800 12434 + GH13_38
CAZyme HRGMv2_0321_8 HRGMv2_0321_8_12 12555 14711 + CE20
Gene ID: HRGMv2_0321_8_3
Type: CAZyme
Location: 2811 - 3635 (+)
Gene ID: HRGMv2_0321_8_4
Type: CAZyme
Location: 3740 - 4603 (+)
Gene ID: HRGMv2_0321_8_5
Type:
Location: 5185 - 5292 (+)
Gene ID: HRGMv2_0321_8_6
Type: pfam
Location: 5486 - 6379 (+)
Gene ID: HRGMv2_0321_8_7
Type: CAZyme
Location: 6376 - 7431 (+)
Gene ID: HRGMv2_0321_8_8
Type: pfam
Location: 7428 - 8546 (+)
Gene ID: HRGMv2_0321_8_9
Type: TC
Location: 8559 - 9728 (+)
Gene ID: HRGMv2_0321_8_10
Type: pfam
Location: 9776 - 10660 (+)
Gene ID: HRGMv2_0321_8_11
Type: CAZyme
Location: 10800 - 12434 (+)
Gene ID: HRGMv2_0321_8_12
Type: CAZyme
Location: 12555 - 14711 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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