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Cluster: HRGMv2_0320_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0320_7 HRGMv2_0320_7_36 35753 37381 - GH43_35
pfam HRGMv2_0320_7 HRGMv2_0320_7_37 37769 38689 - Flavokinase | FAD_syn
pfam HRGMv2_0320_7 HRGMv2_0320_7_38 38661 39278 - Hydrolase | HAD_2
TC HRGMv2_0320_7 HRGMv2_0320_7_39 39275 41959 - 3.A.3.2.42
pfam HRGMv2_0320_7 HRGMv2_0320_7_40 42144 42305 + Rubredoxin
TC HRGMv2_0320_7 HRGMv2_0320_7_41 42351 44048 - 2.A.58.2.2
pfam HRGMv2_0320_7 HRGMv2_0320_7_42 44131 45804 + PRK
CAZyme HRGMv2_0320_7 HRGMv2_0320_7_43 45856 47277 + CE20
Gene ID: HRGMv2_0320_7_36
Type: CAZyme
Location: 35753 - 37381 (-)
Gene ID: HRGMv2_0320_7_37
Type: pfam
Location: 37769 - 38689 (-)
Gene ID: HRGMv2_0320_7_38
Type: pfam
Location: 38661 - 39278 (-)
Gene ID: HRGMv2_0320_7_39
Type: TC
Location: 39275 - 41959 (-)
Gene ID: HRGMv2_0320_7_40
Type: pfam
Location: 42144 - 42305 (+)
Gene ID: HRGMv2_0320_7_41
Type: TC
Location: 42351 - 44048 (-)
Gene ID: HRGMv2_0320_7_42
Type: pfam
Location: 44131 - 45804 (+)
Gene ID: HRGMv2_0320_7_43
Type: CAZyme
Location: 45856 - 47277 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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