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Cluster: HRGMv2_0319_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_2 HRGMv2_0319_2_137 180742 184152 + 1.B.14.6.1
pfam HRGMv2_0319_2 HRGMv2_0319_2_138 184167 185585 + SusD-like_3
sulfatase HRGMv2_0319_2 HRGMv2_0319_2_139 186525 187670 + S1_8
CAZyme HRGMv2_0319_2 HRGMv2_0319_2_140 187757 189946 - GH92
pfam HRGMv2_0319_2 HRGMv2_0319_2_141 190034 191005 - Cupin_3 | PMI_typeI_cat | MPI_cupin_dom
pfam HRGMv2_0319_2 HRGMv2_0319_2_142 191244 192746 + GHL10
TC HRGMv2_0319_2 HRGMv2_0319_2_143 193075 193677 + 1.B.44.2.11
pfam HRGMv2_0319_2 HRGMv2_0319_2_144 194594 195418 + LGT
NULL(UNKNOWN) HRGMv2_0319_2 HRGMv2_0319_2_145 195621 198026 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0319_2 HRGMv2_0319_2_146 198135 200012 + GH32
CAZyme HRGMv2_0319_2 HRGMv2_0319_2_147 200107 202296 + GH36
TC HRGMv2_0319_2 HRGMv2_0319_2_148 202320 203486 + 2.A.1.7.17
Gene ID: HRGMv2_0319_2_137
Type: TC
Location: 180742 - 184152 (+)
Gene ID: HRGMv2_0319_2_138
Type: pfam
Location: 184167 - 185585 (+)
Gene ID: HRGMv2_0319_2_139
Type: sulfatase
Location: 186525 - 187670 (+)
Gene ID: HRGMv2_0319_2_140
Type: CAZyme
Location: 187757 - 189946 (-)
Gene ID: HRGMv2_0319_2_141
Type: pfam
Location: 190034 - 191005 (-)
Gene ID: HRGMv2_0319_2_142
Type: pfam
Location: 191244 - 192746 (+)
Gene ID: HRGMv2_0319_2_143
Type: TC
Location: 193075 - 193677 (+)
Gene ID: HRGMv2_0319_2_144
Type: pfam
Location: 194594 - 195418 (+)
Gene ID: HRGMv2_0319_2_145
Type:
Location: 195621 - 198026 (+)
Gene ID: HRGMv2_0319_2_146
Type: CAZyme
Location: 198135 - 200012 (+)
Gene ID: HRGMv2_0319_2_147
Type: CAZyme
Location: 200107 - 202296 (+)
Gene ID: HRGMv2_0319_2_148
Type: TC
Location: 202320 - 203486 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0319_2_145 vegetarian > vegan 1.23881 0.02512

🧭 Explore Read Mapping of CGC

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