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Cluster: HRGMv2_0319_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0319_2 HRGMv2_0319_2_56 65650 68496 + GH38
CAZyme HRGMv2_0319_2 HRGMv2_0319_2_57 68736 71420 + GH38
CAZyme HRGMv2_0319_2 HRGMv2_0319_2_58 71417 73798 + GH92
STP HRGMv2_0319_2 HRGMv2_0319_2_59 73861 74382 + Sigma70_r2 | Sigma70_r4_2
NULL(UNKNOWN) HRGMv2_0319_2 HRGMv2_0319_2_60 74551 74679 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0319_2 HRGMv2_0319_2_61 74746 77823 + 1.B.14.6.13
TC HRGMv2_0319_2 HRGMv2_0319_2_62 77842 79431 + 8.A.46.2.2
CAZyme HRGMv2_0319_2 HRGMv2_0319_2_63 79458 80441 + GH18
Gene ID: HRGMv2_0319_2_56
Type: CAZyme
Location: 65650 - 68496 (+)
Gene ID: HRGMv2_0319_2_57
Type: CAZyme
Location: 68736 - 71420 (+)
Gene ID: HRGMv2_0319_2_58
Type: CAZyme
Location: 71417 - 73798 (+)
Gene ID: HRGMv2_0319_2_59
Type: STP
Location: 73861 - 74382 (+)
Gene ID: HRGMv2_0319_2_60
Type:
Location: 74551 - 74679 (+)
Gene ID: HRGMv2_0319_2_61
Type: TC
Location: 74746 - 77823 (+)
Gene ID: HRGMv2_0319_2_62
Type: TC
Location: 77842 - 79431 (+)
Gene ID: HRGMv2_0319_2_63
Type: CAZyme
Location: 79458 - 80441 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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