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Cluster: HRGMv2_0319_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_2 HRGMv2_0319_2_30 36095 37234 - 9.B.97.1.2
STP HRGMv2_0319_2 HRGMv2_0319_2_31 37307 37876 - cNMP_binding
CAZyme HRGMv2_0319_2 HRGMv2_0319_2_32 38641 40503 - GH20
pfam HRGMv2_0319_2 HRGMv2_0319_2_33 40708 41913 - Acetate_kinase
pfam HRGMv2_0319_2 HRGMv2_0319_2_34 41947 42957 - PTA_PTB
TC HRGMv2_0319_2 HRGMv2_0319_2_35 43193 43543 + 1.E.14.1.13
TC HRGMv2_0319_2 HRGMv2_0319_2_36 43524 44219 + 2.A.122.1.1
Gene ID: HRGMv2_0319_2_30
Type: TC
Location: 36095 - 37234 (-)
Gene ID: HRGMv2_0319_2_31
Type: STP
Location: 37307 - 37876 (-)
Gene ID: HRGMv2_0319_2_32
Type: CAZyme
Location: 38641 - 40503 (-)
Gene ID: HRGMv2_0319_2_33
Type: pfam
Location: 40708 - 41913 (-)
Gene ID: HRGMv2_0319_2_34
Type: pfam
Location: 41947 - 42957 (-)
Gene ID: HRGMv2_0319_2_35
Type: TC
Location: 43193 - 43543 (+)
Gene ID: HRGMv2_0319_2_36
Type: TC
Location: 43524 - 44219 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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