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Cluster: HRGMv2_0319_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_19 HRGMv2_0319_19_30 35181 36281 - 3.A.1.132.3
pfam HRGMv2_0319_19 HRGMv2_0319_19_31 36290 37048 - Methyltransf_4 | Methyltransf_25 | Methyltransf_31
pfam HRGMv2_0319_19 HRGMv2_0319_19_32 37199 37963 + Patatin
CAZyme HRGMv2_0319_19 HRGMv2_0319_19_33 37974 39668 + GH13_38
NULL(UNKNOWN) HRGMv2_0319_19 HRGMv2_0319_19_34 39933 40649 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0319_19 HRGMv2_0319_19_35 40783 41994 - 2.A.1.35.1
pfam HRGMv2_0319_19 HRGMv2_0319_19_36 41991 43076 - RE_HpaII
NULL(UNKNOWN) HRGMv2_0319_19 HRGMv2_0319_19_37 43176 43778 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0319_19 HRGMv2_0319_19_38 43900 45867 - GH20
TC HRGMv2_0319_19 HRGMv2_0319_19_39 46341 47147 + 1.A.1.22.1
TC HRGMv2_0319_19 HRGMv2_0319_19_40 47140 47844 + 9.B.114.1.1
Gene ID: HRGMv2_0319_19_30
Type: TC
Location: 35181 - 36281 (-)
Gene ID: HRGMv2_0319_19_31
Type: pfam
Location: 36290 - 37048 (-)
Gene ID: HRGMv2_0319_19_32
Type: pfam
Location: 37199 - 37963 (+)
Gene ID: HRGMv2_0319_19_33
Type: CAZyme
Location: 37974 - 39668 (+)
Gene ID: HRGMv2_0319_19_34
Type:
Location: 39933 - 40649 (-)
Gene ID: HRGMv2_0319_19_35
Type: TC
Location: 40783 - 41994 (-)
Gene ID: HRGMv2_0319_19_36
Type: pfam
Location: 41991 - 43076 (-)
Gene ID: HRGMv2_0319_19_37
Type:
Location: 43176 - 43778 (-)
Gene ID: HRGMv2_0319_19_38
Type: CAZyme
Location: 43900 - 45867 (-)
Gene ID: HRGMv2_0319_19_39
Type: TC
Location: 46341 - 47147 (+)
Gene ID: HRGMv2_0319_19_40
Type: TC
Location: 47140 - 47844 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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