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Cluster: HRGMv2_0319_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_18 HRGMv2_0319_18_38 45396 46067 - 9.B.18.1.3
CAZyme HRGMv2_0319_18 HRGMv2_0319_18_39 46055 47182 - GT4
CAZyme HRGMv2_0319_18 HRGMv2_0319_18_40 47185 48420 - GT4
CAZyme HRGMv2_0319_18 HRGMv2_0319_18_41 48417 49733 - GT4
NULL(UNKNOWN) HRGMv2_0319_18 HRGMv2_0319_18_42 50011 51327 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0319_18 HRGMv2_0319_18_43 51364 52362 - GT2
CAZyme HRGMv2_0319_18 HRGMv2_0319_18_44 52359 53231 - GT11
CAZyme HRGMv2_0319_18 HRGMv2_0319_18_45 53231 53974 - GT32
CAZyme HRGMv2_0319_18 HRGMv2_0319_18_46 53964 54854 - GT2
CAZyme HRGMv2_0319_18 HRGMv2_0319_18_47 54899 55837 - GT8
Gene ID: HRGMv2_0319_18_38
Type: TC
Location: 45396 - 46067 (-)
Gene ID: HRGMv2_0319_18_39
Type: CAZyme
Location: 46055 - 47182 (-)
Gene ID: HRGMv2_0319_18_40
Type: CAZyme
Location: 47185 - 48420 (-)
Gene ID: HRGMv2_0319_18_41
Type: CAZyme
Location: 48417 - 49733 (-)
Gene ID: HRGMv2_0319_18_42
Type:
Location: 50011 - 51327 (-)
Gene ID: HRGMv2_0319_18_43
Type: CAZyme
Location: 51364 - 52362 (-)
Gene ID: HRGMv2_0319_18_44
Type: CAZyme
Location: 52359 - 53231 (-)
Gene ID: HRGMv2_0319_18_45
Type: CAZyme
Location: 53231 - 53974 (-)
Gene ID: HRGMv2_0319_18_46
Type: CAZyme
Location: 53964 - 54854 (-)
Gene ID: HRGMv2_0319_18_47
Type: CAZyme
Location: 54899 - 55837 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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