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Cluster: HRGMv2_0319_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_17 HRGMv2_0319_17_45 45509 46876 - 1.B.17.3.5
TC HRGMv2_0319_17 HRGMv2_0319_17_46 46901 50041 - 2.A.6.2.22
TC HRGMv2_0319_17 HRGMv2_0319_17_47 50051 51172 - 2.A.6.2.29
TC HRGMv2_0319_17 HRGMv2_0319_17_48 51343 52353 + 8.A.59.2.1
TF HRGMv2_0319_17 HRGMv2_0319_17_49 52374 53069 + LytTR
CAZyme HRGMv2_0319_17 HRGMv2_0319_17_50 53153 55384 - GH92
NULL(UNKNOWN) HRGMv2_0319_17 HRGMv2_0319_17_51 55708 56457 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0319_17 HRGMv2_0319_17_52 56827 57375 - Ribosomal_S16
TC HRGMv2_0319_17 HRGMv2_0319_17_53 57496 59484 - 2.A.67.4.2
CAZyme HRGMv2_0319_17 HRGMv2_0319_17_54 59639 61987 - GH20
pfam HRGMv2_0319_17 HRGMv2_0319_17_55 62080 63090 - ApbE
TC HRGMv2_0319_17 HRGMv2_0319_17_56 63110 63676 - 2.A.107.1.2
pfam HRGMv2_0319_17 HRGMv2_0319_17_57 63679 64338 - DUF6048
pfam HRGMv2_0319_17 HRGMv2_0319_17_58 64340 64888 - DUF6452
CAZyme HRGMv2_0319_17 HRGMv2_0319_17_59 64894 65844 - GT2
Gene ID: HRGMv2_0319_17_45
Type: TC
Location: 45509 - 46876 (-)
Gene ID: HRGMv2_0319_17_46
Type: TC
Location: 46901 - 50041 (-)
Gene ID: HRGMv2_0319_17_47
Type: TC
Location: 50051 - 51172 (-)
Gene ID: HRGMv2_0319_17_48
Type: TC
Location: 51343 - 52353 (+)
Gene ID: HRGMv2_0319_17_49
Type: TF
Location: 52374 - 53069 (+)
Gene ID: HRGMv2_0319_17_50
Type: CAZyme
Location: 53153 - 55384 (-)
Gene ID: HRGMv2_0319_17_51
Type:
Location: 55708 - 56457 (+)
Gene ID: HRGMv2_0319_17_52
Type: pfam
Location: 56827 - 57375 (-)
Gene ID: HRGMv2_0319_17_53
Type: TC
Location: 57496 - 59484 (-)
Gene ID: HRGMv2_0319_17_54
Type: CAZyme
Location: 59639 - 61987 (-)
Gene ID: HRGMv2_0319_17_55
Type: pfam
Location: 62080 - 63090 (-)
Gene ID: HRGMv2_0319_17_56
Type: TC
Location: 63110 - 63676 (-)
Gene ID: HRGMv2_0319_17_57
Type: pfam
Location: 63679 - 64338 (-)
Gene ID: HRGMv2_0319_17_58
Type: pfam
Location: 64340 - 64888 (-)
Gene ID: HRGMv2_0319_17_59
Type: CAZyme
Location: 64894 - 65844 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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