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Cluster: HRGMv2_0319_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_17 HRGMv2_0319_17_9 8173 9861 + 3.A.1.120.6
NULL(UNKNOWN) HRGMv2_0319_17 HRGMv2_0319_17_10 9951 11303 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0319_17 HRGMv2_0319_17_11 11507 12970 + 2.A.66.1.28
TC HRGMv2_0319_17 HRGMv2_0319_17_12 13036 14361 + 3.A.5.1.1
CAZyme HRGMv2_0319_17 HRGMv2_0319_17_13 14534 15748 - GH171
STP HRGMv2_0319_17 HRGMv2_0319_17_14 15810 16349 + HD
TC HRGMv2_0319_17 HRGMv2_0319_17_15 16431 19211 + 1.B.42.1.8
Gene ID: HRGMv2_0319_17_9
Type: TC
Location: 8173 - 9861 (+)
Gene ID: HRGMv2_0319_17_10
Type:
Location: 9951 - 11303 (-)
Gene ID: HRGMv2_0319_17_11
Type: TC
Location: 11507 - 12970 (+)
Gene ID: HRGMv2_0319_17_12
Type: TC
Location: 13036 - 14361 (+)
Gene ID: HRGMv2_0319_17_13
Type: CAZyme
Location: 14534 - 15748 (-)
Gene ID: HRGMv2_0319_17_14
Type: STP
Location: 15810 - 16349 (+)
Gene ID: HRGMv2_0319_17_15
Type: TC
Location: 16431 - 19211 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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