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Cluster: HRGMv2_0319_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_14 HRGMv2_0319_14_55 78888 80903 + 3.A.16.1.1
pfam HRGMv2_0319_14 HRGMv2_0319_14_56 81098 81937 + CTP_transf_1
CAZyme HRGMv2_0319_14 HRGMv2_0319_14_57 82032 83165 - GT19
pfam HRGMv2_0319_14 HRGMv2_0319_14_58 83162 83929 - SurE
TC HRGMv2_0319_14 HRGMv2_0319_14_59 84189 84956 + 8.A.3.2.3
pfam HRGMv2_0319_14 HRGMv2_0319_14_60 84963 85856 + ParBc | HTH_ParB | ParB_dimer
pfam HRGMv2_0319_14 HRGMv2_0319_14_61 85869 86678 + DUF5683
CAZyme HRGMv2_0319_14 HRGMv2_0319_14_62 86682 87938 + GH23
TC HRGMv2_0319_14 HRGMv2_0319_14_63 88445 89944 - 9.B.160.1.10
TC HRGMv2_0319_14 HRGMv2_0319_14_64 90591 91904 + 9.B.126.2.2
Gene ID: HRGMv2_0319_14_55
Type: TC
Location: 78888 - 80903 (+)
Gene ID: HRGMv2_0319_14_56
Type: pfam
Location: 81098 - 81937 (+)
Gene ID: HRGMv2_0319_14_57
Type: CAZyme
Location: 82032 - 83165 (-)
Gene ID: HRGMv2_0319_14_58
Type: pfam
Location: 83162 - 83929 (-)
Gene ID: HRGMv2_0319_14_59
Type: TC
Location: 84189 - 84956 (+)
Gene ID: HRGMv2_0319_14_60
Type: pfam
Location: 84963 - 85856 (+)
Gene ID: HRGMv2_0319_14_61
Type: pfam
Location: 85869 - 86678 (+)
Gene ID: HRGMv2_0319_14_62
Type: CAZyme
Location: 86682 - 87938 (+)
Gene ID: HRGMv2_0319_14_63
Type: TC
Location: 88445 - 89944 (-)
Gene ID: HRGMv2_0319_14_64
Type: TC
Location: 90591 - 91904 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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