Cluster: HRGMv2_0319_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0319
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0319_10 | HRGMv2_0319_10_39 | 56097 | 57203 | - | GH117 |
| pfam | HRGMv2_0319_10 | HRGMv2_0319_10_40 | 57448 | 59016 | - | GTP_EFTU | MMR_HSR1 | RF3_C | EF-G_D2 |
| pfam | HRGMv2_0319_10 | HRGMv2_0319_10_41 | 59109 | 59654 | - | DUF4924 |
| TC | HRGMv2_0319_10 | HRGMv2_0319_10_42 | 59661 | 60320 | - | 2.A.76.1.6 |
| pfam | HRGMv2_0319_10 | HRGMv2_0319_10_43 | 60502 | 61437 | - | Metallophos |
| TC | HRGMv2_0319_10 | HRGMv2_0319_10_44 | 61547 | 64324 | - | 1.B.14.12.1 |
Gene ID: HRGMv2_0319_10_39
Type: CAZyme
Location: 56097 - 57203 (-)
Type: CAZyme
Location: 56097 - 57203 (-)
Gene ID: HRGMv2_0319_10_40
Type: pfam
Location: 57448 - 59016 (-)
Type: pfam
Location: 57448 - 59016 (-)
Gene ID: HRGMv2_0319_10_41
Type: pfam
Location: 59109 - 59654 (-)
Type: pfam
Location: 59109 - 59654 (-)
Gene ID: HRGMv2_0319_10_42
Type: TC
Location: 59661 - 60320 (-)
Type: TC
Location: 59661 - 60320 (-)
Gene ID: HRGMv2_0319_10_43
Type: pfam
Location: 60502 - 61437 (-)
Type: pfam
Location: 60502 - 61437 (-)
Gene ID: HRGMv2_0319_10_44
Type: TC
Location: 61547 - 64324 (-)
Type: TC
Location: 61547 - 64324 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900542985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0319_10_41 | vegetarian > vegan | 1.38594 | 0.04315 |