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Cluster: HRGMv2_0319_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0319_8 HRGMv2_0319_8_42 51163 52629 + GT2
CAZyme HRGMv2_0319_8 HRGMv2_0319_8_43 52626 53465 + GT11
CAZyme HRGMv2_0319_8 HRGMv2_0319_8_44 53473 54381 + GT2
CAZyme HRGMv2_0319_8 HRGMv2_0319_8_45 54391 55260 + GT14
CAZyme HRGMv2_0319_8 HRGMv2_0319_8_46 55344 56321 + GT2
CAZyme HRGMv2_0319_8 HRGMv2_0319_8_47 56313 57317 - GT2
NULL(UNKNOWN) HRGMv2_0319_8 HRGMv2_0319_8_48 57393 57500 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0319_8 HRGMv2_0319_8_49 57629 58441 + GT2
CAZyme HRGMv2_0319_8 HRGMv2_0319_8_50 58578 59426 + GT2
TC HRGMv2_0319_8 HRGMv2_0319_8_51 59592 61424 - 3.A.1.106.1
Gene ID: HRGMv2_0319_8_42
Type: CAZyme
Location: 51163 - 52629 (+)
Gene ID: HRGMv2_0319_8_43
Type: CAZyme
Location: 52626 - 53465 (+)
Gene ID: HRGMv2_0319_8_44
Type: CAZyme
Location: 53473 - 54381 (+)
Gene ID: HRGMv2_0319_8_45
Type: CAZyme
Location: 54391 - 55260 (+)
Gene ID: HRGMv2_0319_8_46
Type: CAZyme
Location: 55344 - 56321 (+)
Gene ID: HRGMv2_0319_8_47
Type: CAZyme
Location: 56313 - 57317 (-)
Gene ID: HRGMv2_0319_8_48
Type:
Location: 57393 - 57500 (+)
Gene ID: HRGMv2_0319_8_49
Type: CAZyme
Location: 57629 - 58441 (+)
Gene ID: HRGMv2_0319_8_50
Type: CAZyme
Location: 58578 - 59426 (+)
Gene ID: HRGMv2_0319_8_51
Type: TC
Location: 59592 - 61424 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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