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Cluster: HRGMv2_0319_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_7 HRGMv2_0319_7_110 128459 129733 + 2.A.1.2.97
pfam HRGMv2_0319_7 HRGMv2_0319_7_111 129838 130185 - Asp_decarbox
pfam HRGMv2_0319_7 HRGMv2_0319_7_112 130197 131042 - Pantoate_ligase
CAZyme HRGMv2_0319_7 HRGMv2_0319_7_113 131300 132121 + GT5
pfam HRGMv2_0319_7 HRGMv2_0319_7_114 132145 133560 + DUF4270
CAZyme HRGMv2_0319_7 HRGMv2_0319_7_115 133741 135147 - GH57
CAZyme HRGMv2_0319_7 HRGMv2_0319_7_116 135165 136436 - GT4
CAZyme HRGMv2_0319_7 HRGMv2_0319_7_117 136455 138395 - GH133
Gene ID: HRGMv2_0319_7_110
Type: TC
Location: 128459 - 129733 (+)
Gene ID: HRGMv2_0319_7_111
Type: pfam
Location: 129838 - 130185 (-)
Gene ID: HRGMv2_0319_7_112
Type: pfam
Location: 130197 - 131042 (-)
Gene ID: HRGMv2_0319_7_113
Type: CAZyme
Location: 131300 - 132121 (+)
Gene ID: HRGMv2_0319_7_114
Type: pfam
Location: 132145 - 133560 (+)
Gene ID: HRGMv2_0319_7_115
Type: CAZyme
Location: 133741 - 135147 (-)
Gene ID: HRGMv2_0319_7_116
Type: CAZyme
Location: 135165 - 136436 (-)
Gene ID: HRGMv2_0319_7_117
Type: CAZyme
Location: 136455 - 138395 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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