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Cluster: HRGMv2_0319_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_7 HRGMv2_0319_7_76 88770 90224 - 3.A.1.131.2
CAZyme HRGMv2_0319_7 HRGMv2_0319_7_77 90317 92314 - GH13_14
pfam HRGMv2_0319_7 HRGMv2_0319_7_78 92327 92893 - RuvC
pfam HRGMv2_0319_7 HRGMv2_0319_7_79 92890 93195 - DUF4286
TC HRGMv2_0319_7 HRGMv2_0319_7_80 93341 95005 + 4.C.1.1.4
pfam HRGMv2_0319_7 HRGMv2_0319_7_81 95399 96502 - Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
pfam HRGMv2_0319_7 HRGMv2_0319_7_82 96670 96846 - Hc1
TC HRGMv2_0319_7 HRGMv2_0319_7_83 97065 97964 + 2.A.4.1.2
Gene ID: HRGMv2_0319_7_76
Type: TC
Location: 88770 - 90224 (-)
Gene ID: HRGMv2_0319_7_77
Type: CAZyme
Location: 90317 - 92314 (-)
Gene ID: HRGMv2_0319_7_78
Type: pfam
Location: 92327 - 92893 (-)
Gene ID: HRGMv2_0319_7_79
Type: pfam
Location: 92890 - 93195 (-)
Gene ID: HRGMv2_0319_7_80
Type: TC
Location: 93341 - 95005 (+)
Gene ID: HRGMv2_0319_7_81
Type: pfam
Location: 95399 - 96502 (-)
Gene ID: HRGMv2_0319_7_82
Type: pfam
Location: 96670 - 96846 (-)
Gene ID: HRGMv2_0319_7_83
Type: TC
Location: 97065 - 97964 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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