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Cluster: HRGMv2_0319_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0319_6 HRGMv2_0319_6_92 118019 120685 + GH77
NULL(UNKNOWN) HRGMv2_0319_6 HRGMv2_0319_6_93 121679 122242 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0319_6 HRGMv2_0319_6_94 122636 123748 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0319_6 HRGMv2_0319_6_95 123822 125195 - 2.A.2.6.2
pfam HRGMv2_0319_6 HRGMv2_0319_6_96 125226 126821 - DUF6377
CAZyme HRGMv2_0319_6 HRGMv2_0319_6_97 127074 128903 + GH13_46
CAZyme HRGMv2_0319_6 HRGMv2_0319_6_98 129082 131262 + GH97
TC HRGMv2_0319_6 HRGMv2_0319_6_99 131464 134469 + 1.B.14.6.1
TC HRGMv2_0319_6 HRGMv2_0319_6_100 134488 136158 + 8.A.46.1.1
pfam HRGMv2_0319_6 HRGMv2_0319_6_101 136178 137332 + SusE | SusF_SusE
TC HRGMv2_0319_6 HRGMv2_0319_6_102 137590 140781 + 1.B.14.6.1
Gene ID: HRGMv2_0319_6_92
Type: CAZyme
Location: 118019 - 120685 (+)
Gene ID: HRGMv2_0319_6_93
Type:
Location: 121679 - 122242 (+)
Gene ID: HRGMv2_0319_6_94
Type:
Location: 122636 - 123748 (-)
Gene ID: HRGMv2_0319_6_95
Type: TC
Location: 123822 - 125195 (-)
Gene ID: HRGMv2_0319_6_96
Type: pfam
Location: 125226 - 126821 (-)
Gene ID: HRGMv2_0319_6_97
Type: CAZyme
Location: 127074 - 128903 (+)
Gene ID: HRGMv2_0319_6_98
Type: CAZyme
Location: 129082 - 131262 (+)
Gene ID: HRGMv2_0319_6_99
Type: TC
Location: 131464 - 134469 (+)
Gene ID: HRGMv2_0319_6_100
Type: TC
Location: 134488 - 136158 (+)
Gene ID: HRGMv2_0319_6_101
Type: pfam
Location: 136178 - 137332 (+)
Gene ID: HRGMv2_0319_6_102
Type: TC
Location: 137590 - 140781 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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