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Cluster: HRGMv2_0319_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_5 HRGMv2_0319_5_1 67 3129 + 1.B.14.6.13
TC HRGMv2_0319_5 HRGMv2_0319_5_2 3142 4707 + 8.A.46.2.1
CAZyme HRGMv2_0319_5 HRGMv2_0319_5_3 4732 5880 + GH18
pfam HRGMv2_0319_5 HRGMv2_0319_5_4 5893 7044 + BT_3987-like_N | Laminin_G_3
sulfatase HRGMv2_0319_5 HRGMv2_0319_5_5 7357 8529 - S1_7
TC HRGMv2_0319_5 HRGMv2_0319_5_6 8550 9146 - 3.A.8.1.1
TC HRGMv2_0319_5 HRGMv2_0319_5_7 9379 10998 + 3.A.1.121.4
pfam HRGMv2_0319_5 HRGMv2_0319_5_8 11153 11638 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
CAZyme HRGMv2_0319_5 HRGMv2_0319_5_9 11760 12650 + GH73
Gene ID: HRGMv2_0319_5_1
Type: TC
Location: 67 - 3129 (+)
Gene ID: HRGMv2_0319_5_2
Type: TC
Location: 3142 - 4707 (+)
Gene ID: HRGMv2_0319_5_3
Type: CAZyme
Location: 4732 - 5880 (+)
Gene ID: HRGMv2_0319_5_4
Type: pfam
Location: 5893 - 7044 (+)
Gene ID: HRGMv2_0319_5_5
Type: sulfatase
Location: 7357 - 8529 (-)
Gene ID: HRGMv2_0319_5_6
Type: TC
Location: 8550 - 9146 (-)
Gene ID: HRGMv2_0319_5_7
Type: TC
Location: 9379 - 10998 (+)
Gene ID: HRGMv2_0319_5_8
Type: pfam
Location: 11153 - 11638 (-)
Gene ID: HRGMv2_0319_5_9
Type: CAZyme
Location: 11760 - 12650 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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