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Cluster: HRGMv2_0319_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_3 HRGMv2_0319_3_19 24177 25439 - 3.D.5.1.1
TC HRGMv2_0319_3 HRGMv2_0319_3_20 25465 26088 - 3.D.5.1.1
TC HRGMv2_0319_3 HRGMv2_0319_3_21 26107 26745 - 3.D.5.1.1
pfam HRGMv2_0319_3 HRGMv2_0319_3_22 26765 27445 - FMN_bind
TC HRGMv2_0319_3 HRGMv2_0319_3_23 27460 28623 - 3.D.5.1.1
pfam HRGMv2_0319_3 HRGMv2_0319_3_24 28696 30045 - NQRA_N | NQRA_SLBB | NQRA_2nd
CAZyme HRGMv2_0319_3 HRGMv2_0319_3_25 30362 31153 - GH16_3
Gene ID: HRGMv2_0319_3_19
Type: TC
Location: 24177 - 25439 (-)
Gene ID: HRGMv2_0319_3_20
Type: TC
Location: 25465 - 26088 (-)
Gene ID: HRGMv2_0319_3_21
Type: TC
Location: 26107 - 26745 (-)
Gene ID: HRGMv2_0319_3_22
Type: pfam
Location: 26765 - 27445 (-)
Gene ID: HRGMv2_0319_3_23
Type: TC
Location: 27460 - 28623 (-)
Gene ID: HRGMv2_0319_3_24
Type: pfam
Location: 28696 - 30045 (-)
Gene ID: HRGMv2_0319_3_25
Type: CAZyme
Location: 30362 - 31153 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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