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Cluster: HRGMv2_0319_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0319_1 HRGMv2_0319_1_60 51687 55004 + 1.B.14.6.13
TC HRGMv2_0319_1 HRGMv2_0319_1_61 55019 56635 + 8.A.46.2.2
pfam HRGMv2_0319_1 HRGMv2_0319_1_62 56649 57623 + GH18_BT1044-like | GH18_BT1044-like | TIM-barrel_EndoS
pfam HRGMv2_0319_1 HRGMv2_0319_1_63 57651 58790 + BT_3987-like_N | Laminin_G_3
CAZyme HRGMv2_0319_1 HRGMv2_0319_1_64 58920 61670 + GH2
pfam HRGMv2_0319_1 HRGMv2_0319_1_65 61690 62988 + GDE_C | Glyco_hydro_36 | Bac_rhamnosid6H
pfam HRGMv2_0319_1 HRGMv2_0319_1_66 63101 64321 - Fe-ADH | ADH_Fe_C
TC HRGMv2_0319_1 HRGMv2_0319_1_67 64564 65625 - 3.A.1.105.4
TC HRGMv2_0319_1 HRGMv2_0319_1_68 65730 66830 - 3.A.1.105.4
TC HRGMv2_0319_1 HRGMv2_0319_1_69 66854 68323 - 3.A.1.105.15
TC HRGMv2_0319_1 HRGMv2_0319_1_70 68340 69239 - 3.A.1.105.4
Gene ID: HRGMv2_0319_1_60
Type: TC
Location: 51687 - 55004 (+)
Gene ID: HRGMv2_0319_1_61
Type: TC
Location: 55019 - 56635 (+)
Gene ID: HRGMv2_0319_1_62
Type: pfam
Location: 56649 - 57623 (+)
Gene ID: HRGMv2_0319_1_63
Type: pfam
Location: 57651 - 58790 (+)
Gene ID: HRGMv2_0319_1_64
Type: CAZyme
Location: 58920 - 61670 (+)
Gene ID: HRGMv2_0319_1_65
Type: pfam
Location: 61690 - 62988 (+)
Gene ID: HRGMv2_0319_1_66
Type: pfam
Location: 63101 - 64321 (-)
Gene ID: HRGMv2_0319_1_67
Type: TC
Location: 64564 - 65625 (-)
Gene ID: HRGMv2_0319_1_68
Type: TC
Location: 65730 - 66830 (-)
Gene ID: HRGMv2_0319_1_69
Type: TC
Location: 66854 - 68323 (-)
Gene ID: HRGMv2_0319_1_70
Type: TC
Location: 68340 - 69239 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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