Cluster: HRGMv2_0311_CGC38
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0311
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0311_25 | HRGMv2_0311_25_12 | 16846 | 18078 | + | 2.A.1.7.1 |
| STP | HRGMv2_0311_25 | HRGMv2_0311_25_13 | 18083 | 19000 | + | PfkB |
| CAZyme | HRGMv2_0311_25 | HRGMv2_0311_25_14 | 18972 | 21218 | - | GH92 |
| pfam | HRGMv2_0311_25 | HRGMv2_0311_25_15 | 21300 | 22412 | + | HGSNAT_cat |
| TC | HRGMv2_0311_25 | HRGMv2_0311_25_16 | 22478 | 22858 | + | 2.A.7.34.3 |
| TC | HRGMv2_0311_25 | HRGMv2_0311_25_17 | 23173 | 26202 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0311_25 | HRGMv2_0311_25_18 | 26212 | 27876 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0311_25 | HRGMv2_0311_25_19 | 27966 | 29414 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0311_25 | HRGMv2_0311_25_20 | 29559 | 30887 | + | GH28 |
| CAZyme | HRGMv2_0311_25 | HRGMv2_0311_25_21 | 30884 | 34246 | + | GH89 |
| CAZyme | HRGMv2_0311_25 | HRGMv2_0311_25_22 | 34267 | 37275 | + | GH95 |
Gene ID: HRGMv2_0311_25_12
Type: TC
Location: 16846 - 18078 (+)
Type: TC
Location: 16846 - 18078 (+)
Gene ID: HRGMv2_0311_25_13
Type: STP
Location: 18083 - 19000 (+)
Type: STP
Location: 18083 - 19000 (+)
Gene ID: HRGMv2_0311_25_14
Type: CAZyme
Location: 18972 - 21218 (-)
Type: CAZyme
Location: 18972 - 21218 (-)
Gene ID: HRGMv2_0311_25_15
Type: pfam
Location: 21300 - 22412 (+)
Type: pfam
Location: 21300 - 22412 (+)
Gene ID: HRGMv2_0311_25_16
Type: TC
Location: 22478 - 22858 (+)
Type: TC
Location: 22478 - 22858 (+)
Gene ID: HRGMv2_0311_25_17
Type: TC
Location: 23173 - 26202 (+)
Type: TC
Location: 23173 - 26202 (+)
Gene ID: HRGMv2_0311_25_18
Type: pfam
Location: 26212 - 27876 (+)
Type: pfam
Location: 26212 - 27876 (+)
Gene ID: HRGMv2_0311_25_19
Type:
Location: 27966 - 29414 (+)
Type:
Location: 27966 - 29414 (+)
Gene ID: HRGMv2_0311_25_20
Type: CAZyme
Location: 29559 - 30887 (+)
Type: CAZyme
Location: 29559 - 30887 (+)
Gene ID: HRGMv2_0311_25_21
Type: CAZyme
Location: 30884 - 34246 (+)
Type: CAZyme
Location: 30884 - 34246 (+)
Gene ID: HRGMv2_0311_25_22
Type: CAZyme
Location: 34267 - 37275 (+)
Type: CAZyme
Location: 34267 - 37275 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.