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Cluster: HRGMv2_0311_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0311_11 HRGMv2_0311_11_2 1562 3316 - GH67
CAZyme HRGMv2_0311_11 HRGMv2_0311_11_3 3313 4284 - GH43_1
CAZyme HRGMv2_0311_11 HRGMv2_0311_11_4 4287 5417 - GH10
TC HRGMv2_0311_11 HRGMv2_0311_11_5 5451 6869 - 2.A.2.3.2
CAZyme HRGMv2_0311_11 HRGMv2_0311_11_6 6920 8626 - GH35
CAZyme HRGMv2_0311_11 HRGMv2_0311_11_7 8721 11036 - GH10
pfam HRGMv2_0311_11 HRGMv2_0311_11_8 11074 12492 - SGBP_B_XBD
pfam HRGMv2_0311_11 HRGMv2_0311_11_9 12510 14201 - SusD_RagB | SusD-like_3
TC HRGMv2_0311_11 HRGMv2_0311_11_10 14217 17372 - 1.B.14.6.1
Gene ID: HRGMv2_0311_11_2
Type: CAZyme
Location: 1562 - 3316 (-)
Gene ID: HRGMv2_0311_11_3
Type: CAZyme
Location: 3313 - 4284 (-)
Gene ID: HRGMv2_0311_11_4
Type: CAZyme
Location: 4287 - 5417 (-)
Gene ID: HRGMv2_0311_11_5
Type: TC
Location: 5451 - 6869 (-)
Gene ID: HRGMv2_0311_11_6
Type: CAZyme
Location: 6920 - 8626 (-)
Gene ID: HRGMv2_0311_11_7
Type: CAZyme
Location: 8721 - 11036 (-)
Gene ID: HRGMv2_0311_11_8
Type: pfam
Location: 11074 - 12492 (-)
Gene ID: HRGMv2_0311_11_9
Type: pfam
Location: 12510 - 14201 (-)
Gene ID: HRGMv2_0311_11_10
Type: TC
Location: 14217 - 17372 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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