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Cluster: HRGMv2_0311_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0311_10 HRGMv2_0311_10_1 75 1517 + 2.A.66.2.23
pfam HRGMv2_0311_10 HRGMv2_0311_10_2 1531 2316 - PP2C | PP2C_2
pfam HRGMv2_0311_10 HRGMv2_0311_10_3 2322 4091 - WG_beta_rep
TC HRGMv2_0311_10 HRGMv2_0311_10_4 4095 5621 - 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_0311_10 HRGMv2_0311_10_5 5637 6800 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0311_10 HRGMv2_0311_10_6 6827 8785 - BACON | BACON | BACON | OMP_b-brl_2
TC HRGMv2_0311_10 HRGMv2_0311_10_7 8782 10089 - 1.I.1.1.3
CAZyme HRGMv2_0311_10 HRGMv2_0311_10_8 10091 11071 - GH73
Gene ID: HRGMv2_0311_10_1
Type: TC
Location: 75 - 1517 (+)
Gene ID: HRGMv2_0311_10_2
Type: pfam
Location: 1531 - 2316 (-)
Gene ID: HRGMv2_0311_10_3
Type: pfam
Location: 2322 - 4091 (-)
Gene ID: HRGMv2_0311_10_4
Type: TC
Location: 4095 - 5621 (-)
Gene ID: HRGMv2_0311_10_5
Type:
Location: 5637 - 6800 (-)
Gene ID: HRGMv2_0311_10_6
Type: pfam
Location: 6827 - 8785 (-)
Gene ID: HRGMv2_0311_10_7
Type: TC
Location: 8782 - 10089 (-)
Gene ID: HRGMv2_0311_10_8
Type: CAZyme
Location: 10091 - 11071 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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