dbCAN Logo

Cluster: HRGMv2_0308_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0308_46 HRGMv2_0308_46_1 3 1310 - GH2
STP HRGMv2_0308_46 HRGMv2_0308_46_2 1320 3233 - Pyr_redox_2
NULL(UNKNOWN) HRGMv2_0308_46 HRGMv2_0308_46_3 3335 4240 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0308_46 HRGMv2_0308_46_4 4338 5606 - GH5_38
TC HRGMv2_0308_46 HRGMv2_0308_46_5 5636 7354 - 8.A.46.1.3
TC HRGMv2_0308_46 HRGMv2_0308_46_6 7377 10514 - 1.B.14.6.1
CAZyme HRGMv2_0308_46 HRGMv2_0308_46_7 10620 12488 - PL35
CAZyme HRGMv2_0308_46 HRGMv2_0308_46_8 12472 13683 - GH88
TF HRGMv2_0308_46 HRGMv2_0308_46_9 13989 17981 + 0035607
CAZyme HRGMv2_0308_46 HRGMv2_0308_46_10 18012 19292 + CE7
Gene ID: HRGMv2_0308_46_1
Type: CAZyme
Location: 3 - 1310 (-)
Gene ID: HRGMv2_0308_46_2
Type: STP
Location: 1320 - 3233 (-)
Gene ID: HRGMv2_0308_46_3
Type:
Location: 3335 - 4240 (-)
Gene ID: HRGMv2_0308_46_4
Type: CAZyme
Location: 4338 - 5606 (-)
Gene ID: HRGMv2_0308_46_5
Type: TC
Location: 5636 - 7354 (-)
Gene ID: HRGMv2_0308_46_6
Type: TC
Location: 7377 - 10514 (-)
Gene ID: HRGMv2_0308_46_7
Type: CAZyme
Location: 10620 - 12488 (-)
Gene ID: HRGMv2_0308_46_8
Type: CAZyme
Location: 12472 - 13683 (-)
Gene ID: HRGMv2_0308_46_9
Type: TF
Location: 13989 - 17981 (+)
Gene ID: HRGMv2_0308_46_10
Type: CAZyme
Location: 18012 - 19292 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List