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Cluster: HRGMv2_0308_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0308_42 HRGMv2_0308_42_7 4585 5541 + 8.A.5.1.6
TC HRGMv2_0308_42 HRGMv2_0308_42_8 5579 6274 - 2.A.122.1.1
TC HRGMv2_0308_42 HRGMv2_0308_42_9 6279 6638 - 1.E.14.1.13
NULL(UNKNOWN) HRGMv2_0308_42 HRGMv2_0308_42_10 6855 7604 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0308_42 HRGMv2_0308_42_11 7648 10194 - GH115
CAZyme HRGMv2_0308_42 HRGMv2_0308_42_12 10297 11259 - GH43_34
CAZyme HRGMv2_0308_42 HRGMv2_0308_42_13 11351 12997 - GH32
CAZyme HRGMv2_0308_42 HRGMv2_0308_42_14 13135 15195 - GH127
pfam HRGMv2_0308_42 HRGMv2_0308_42_15 15237 16178 - Exo_endo_phos
CAZyme HRGMv2_0308_42 HRGMv2_0308_42_16 16208 17671 - GH125
Gene ID: HRGMv2_0308_42_7
Type: TC
Location: 4585 - 5541 (+)
Gene ID: HRGMv2_0308_42_8
Type: TC
Location: 5579 - 6274 (-)
Gene ID: HRGMv2_0308_42_9
Type: TC
Location: 6279 - 6638 (-)
Gene ID: HRGMv2_0308_42_10
Type:
Location: 6855 - 7604 (+)
Gene ID: HRGMv2_0308_42_11
Type: CAZyme
Location: 7648 - 10194 (-)
Gene ID: HRGMv2_0308_42_12
Type: CAZyme
Location: 10297 - 11259 (-)
Gene ID: HRGMv2_0308_42_13
Type: CAZyme
Location: 11351 - 12997 (-)
Gene ID: HRGMv2_0308_42_14
Type: CAZyme
Location: 13135 - 15195 (-)
Gene ID: HRGMv2_0308_42_15
Type: pfam
Location: 15237 - 16178 (-)
Gene ID: HRGMv2_0308_42_16
Type: CAZyme
Location: 16208 - 17671 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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