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Cluster: HRGMv2_0308_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0308_2 HRGMv2_0308_2_24 27617 28813 - 2.A.23.2.7
pfam HRGMv2_0308_2 HRGMv2_0308_2_25 28815 30026 - Aminotran_1_2 | Aminotran_5
pfam HRGMv2_0308_2 HRGMv2_0308_2_26 30026 31312 - SUFBD_core | SufBD_N | SufBD_N
TC HRGMv2_0308_2 HRGMv2_0308_2_27 31309 32064 - 3.A.1.3.15
TC HRGMv2_0308_2 HRGMv2_0308_2_28 32179 34299 - 1.B.6.1.14
pfam HRGMv2_0308_2 HRGMv2_0308_2_29 34559 35167 - ADK | AAA_17 | AAA_33
STP HRGMv2_0308_2 HRGMv2_0308_2_30 35252 35797 - Pribosyltran
CAZyme HRGMv2_0308_2 HRGMv2_0308_2_31 35807 37123 - GT30
Gene ID: HRGMv2_0308_2_24
Type: TC
Location: 27617 - 28813 (-)
Gene ID: HRGMv2_0308_2_25
Type: pfam
Location: 28815 - 30026 (-)
Gene ID: HRGMv2_0308_2_26
Type: pfam
Location: 30026 - 31312 (-)
Gene ID: HRGMv2_0308_2_27
Type: TC
Location: 31309 - 32064 (-)
Gene ID: HRGMv2_0308_2_28
Type: TC
Location: 32179 - 34299 (-)
Gene ID: HRGMv2_0308_2_29
Type: pfam
Location: 34559 - 35167 (-)
Gene ID: HRGMv2_0308_2_30
Type: STP
Location: 35252 - 35797 (-)
Gene ID: HRGMv2_0308_2_31
Type: CAZyme
Location: 35807 - 37123 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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