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Cluster: HRGMv2_0308_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0308_1 HRGMv2_0308_1_38 47340 48185 - 3.A.1.124.1
pfam HRGMv2_0308_1 HRGMv2_0308_1_39 48367 50004 - Cpn60_TCP1
pfam HRGMv2_0308_1 HRGMv2_0308_1_40 50069 50341 - Cpn10
CAZyme HRGMv2_0308_1 HRGMv2_0308_1_41 50524 51951 - GH13_28
TC HRGMv2_0308_1 HRGMv2_0308_1_42 52075 52779 + 3.A.25.1.1
pfam HRGMv2_0308_1 HRGMv2_0308_1_43 52791 53552 + DHODB_Fe-S_bind
STP HRGMv2_0308_1 HRGMv2_0308_1_44 53549 55057 + Pyr_redox_2
TC HRGMv2_0308_1 HRGMv2_0308_1_45 55080 56093 - 1.A.23.2.1
pfam HRGMv2_0308_1 HRGMv2_0308_1_46 56161 57618 - TRAM | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
pfam HRGMv2_0308_1 HRGMv2_0308_1_47 57761 58459 + Vut_1
TC HRGMv2_0308_1 HRGMv2_0308_1_48 58492 60393 - 3.A.24.1.1
Gene ID: HRGMv2_0308_1_38
Type: TC
Location: 47340 - 48185 (-)
Gene ID: HRGMv2_0308_1_39
Type: pfam
Location: 48367 - 50004 (-)
Gene ID: HRGMv2_0308_1_40
Type: pfam
Location: 50069 - 50341 (-)
Gene ID: HRGMv2_0308_1_41
Type: CAZyme
Location: 50524 - 51951 (-)
Gene ID: HRGMv2_0308_1_42
Type: TC
Location: 52075 - 52779 (+)
Gene ID: HRGMv2_0308_1_43
Type: pfam
Location: 52791 - 53552 (+)
Gene ID: HRGMv2_0308_1_44
Type: STP
Location: 53549 - 55057 (+)
Gene ID: HRGMv2_0308_1_45
Type: TC
Location: 55080 - 56093 (-)
Gene ID: HRGMv2_0308_1_46
Type: pfam
Location: 56161 - 57618 (-)
Gene ID: HRGMv2_0308_1_47
Type: pfam
Location: 57761 - 58459 (+)
Gene ID: HRGMv2_0308_1_48
Type: TC
Location: 58492 - 60393 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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