Cluster: HRGMv2_0305_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0305
- CGC Family ID: CGCFAM_06947
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0305_1 | HRGMv2_0305_1_113 | 132258 | 133340 | + | 2.A.6.2.28 |
| TC | HRGMv2_0305_1 | HRGMv2_0305_1_114 | 133362 | 136400 | + | 2.A.6.2.33 |
| pfam | HRGMv2_0305_1 | HRGMv2_0305_1_115 | 136390 | 137742 | + | OEP | OEP |
| pfam | HRGMv2_0305_1 | HRGMv2_0305_1_116 | 137788 | 138465 | + | Lipase_GDSL_lke |
| CAZyme | HRGMv2_0305_1 | HRGMv2_0305_1_117 | 138587 | 140506 | - | GH97 |
| CAZyme | HRGMv2_0305_1 | HRGMv2_0305_1_118 | 140656 | 142959 | - | GH92 |
| NULL(UNKNOWN) | HRGMv2_0305_1 | HRGMv2_0305_1_119 | 144330 | 144533 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0305_1 | HRGMv2_0305_1_120 | 144822 | 147401 | - | GH78 |
| CAZyme | HRGMv2_0305_1 | HRGMv2_0305_1_121 | 147935 | 149971 | - | GH146 |
| pfam | HRGMv2_0305_1 | HRGMv2_0305_1_122 | 150068 | 151165 | - | BT_3987-like_N | BT_3044-like_C | DUF4973 |
| pfam | HRGMv2_0305_1 | HRGMv2_0305_1_123 | 151186 | 153246 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0305_1 | HRGMv2_0305_1_124 | 153290 | 156391 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0305_1_113
Type: TC
Location: 132258 - 133340 (+)
Type: TC
Location: 132258 - 133340 (+)
Gene ID: HRGMv2_0305_1_114
Type: TC
Location: 133362 - 136400 (+)
Type: TC
Location: 133362 - 136400 (+)
Gene ID: HRGMv2_0305_1_115
Type: pfam
Location: 136390 - 137742 (+)
Type: pfam
Location: 136390 - 137742 (+)
Gene ID: HRGMv2_0305_1_116
Type: pfam
Location: 137788 - 138465 (+)
Type: pfam
Location: 137788 - 138465 (+)
Gene ID: HRGMv2_0305_1_117
Type: CAZyme
Location: 138587 - 140506 (-)
Type: CAZyme
Location: 138587 - 140506 (-)
Gene ID: HRGMv2_0305_1_118
Type: CAZyme
Location: 140656 - 142959 (-)
Type: CAZyme
Location: 140656 - 142959 (-)
Gene ID: HRGMv2_0305_1_119
Type:
Location: 144330 - 144533 (-)
Type:
Location: 144330 - 144533 (-)
Gene ID: HRGMv2_0305_1_120
Type: CAZyme
Location: 144822 - 147401 (-)
Type: CAZyme
Location: 144822 - 147401 (-)
Gene ID: HRGMv2_0305_1_121
Type: CAZyme
Location: 147935 - 149971 (-)
Type: CAZyme
Location: 147935 - 149971 (-)
Gene ID: HRGMv2_0305_1_122
Type: pfam
Location: 150068 - 151165 (-)
Type: pfam
Location: 150068 - 151165 (-)
Gene ID: HRGMv2_0305_1_123
Type: pfam
Location: 151186 - 153246 (-)
Type: pfam
Location: 151186 - 153246 (-)
Gene ID: HRGMv2_0305_1_124
Type: TC
Location: 153290 - 156391 (-)
Type: TC
Location: 153290 - 156391 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900554695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.