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Cluster: HRGMv2_0301_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0301_1 HRGMv2_0301_1_197 252933 254327 + GH33
CAZyme HRGMv2_0301_1 HRGMv2_0301_1_198 254402 255808 + GH123
NULL(UNKNOWN) HRGMv2_0301_1 HRGMv2_0301_1_199 256223 256747 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0301_1 HRGMv2_0301_1_200 256793 257101 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0301_1 HRGMv2_0301_1_201 258030 259562 - 8.A.46.2.2
TC HRGMv2_0301_1 HRGMv2_0301_1_202 259567 262905 - 1.B.14.6.13
TF HRGMv2_0301_1 HRGMv2_0301_1_203 263163 263687 + GerE
STP HRGMv2_0301_1 HRGMv2_0301_1_204 264367 265344 + FecR
CAZyme HRGMv2_0301_1 HRGMv2_0301_1_205 265419 268478 + GH2
Gene ID: HRGMv2_0301_1_197
Type: CAZyme
Location: 252933 - 254327 (+)
Gene ID: HRGMv2_0301_1_198
Type: CAZyme
Location: 254402 - 255808 (+)
Gene ID: HRGMv2_0301_1_199
Type:
Location: 256223 - 256747 (+)
Gene ID: HRGMv2_0301_1_200
Type:
Location: 256793 - 257101 (+)
Gene ID: HRGMv2_0301_1_201
Type: TC
Location: 258030 - 259562 (-)
Gene ID: HRGMv2_0301_1_202
Type: TC
Location: 259567 - 262905 (-)
Gene ID: HRGMv2_0301_1_203
Type: TF
Location: 263163 - 263687 (+)
Gene ID: HRGMv2_0301_1_204
Type: STP
Location: 264367 - 265344 (+)
Gene ID: HRGMv2_0301_1_205
Type: CAZyme
Location: 265419 - 268478 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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