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Cluster: HRGMv2_0301_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0301_8 HRGMv2_0301_8_80 100775 104134 + 3.A.5.1.3
TC HRGMv2_0301_8 HRGMv2_0301_8_81 104115 104867 + 3.A.1.147.2
TC HRGMv2_0301_8 HRGMv2_0301_8_82 105100 107214 - 9.B.14.3.1
pfam HRGMv2_0301_8 HRGMv2_0301_8_83 107348 109045 - DHOR
peptidase HRGMv2_0301_8 HRGMv2_0301_8_84 109162 110520 - M75.UPW
TC HRGMv2_0301_8 HRGMv2_0301_8_85 110569 111873 - 1.B.3.3.1
NULL(UNKNOWN) HRGMv2_0301_8 HRGMv2_0301_8_86 112540 113496 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0301_8 HRGMv2_0301_8_87 113501 115585 - GH13_8
Gene ID: HRGMv2_0301_8_80
Type: TC
Location: 100775 - 104134 (+)
Gene ID: HRGMv2_0301_8_81
Type: TC
Location: 104115 - 104867 (+)
Gene ID: HRGMv2_0301_8_82
Type: TC
Location: 105100 - 107214 (-)
Gene ID: HRGMv2_0301_8_83
Type: pfam
Location: 107348 - 109045 (-)
Gene ID: HRGMv2_0301_8_84
Type: peptidase
Location: 109162 - 110520 (-)
Gene ID: HRGMv2_0301_8_85
Type: TC
Location: 110569 - 111873 (-)
Gene ID: HRGMv2_0301_8_86
Type:
Location: 112540 - 113496 (-)
Gene ID: HRGMv2_0301_8_87
Type: CAZyme
Location: 113501 - 115585 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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