Cluster: HRGMv2_0301_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0301
- CGC Family ID: CGCFAM_00648
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0301_7 | HRGMv2_0301_7_42 | 47885 | 51664 | - | GH85 |
| CAZyme | HRGMv2_0301_7 | HRGMv2_0301_7_43 | 51876 | 55610 | - | GH85 |
| CAZyme | HRGMv2_0301_7 | HRGMv2_0301_7_44 | 56038 | 59070 | - | GH85 |
| TC | HRGMv2_0301_7 | HRGMv2_0301_7_45 | 59170 | 61002 | - | 8.A.46.2.2 |
| TC | HRGMv2_0301_7 | HRGMv2_0301_7_46 | 61159 | 64536 | - | 1.B.14.6.2 |
Gene ID: HRGMv2_0301_7_42
Type: CAZyme
Location: 47885 - 51664 (-)
Type: CAZyme
Location: 47885 - 51664 (-)
Gene ID: HRGMv2_0301_7_43
Type: CAZyme
Location: 51876 - 55610 (-)
Type: CAZyme
Location: 51876 - 55610 (-)
Gene ID: HRGMv2_0301_7_44
Type: CAZyme
Location: 56038 - 59070 (-)
Type: CAZyme
Location: 56038 - 59070 (-)
Gene ID: HRGMv2_0301_7_45
Type: TC
Location: 59170 - 61002 (-)
Type: TC
Location: 59170 - 61002 (-)
Gene ID: HRGMv2_0301_7_46
Type: TC
Location: 61159 - 64536 (-)
Type: TC
Location: 61159 - 64536 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella melaninogenica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.