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Cluster: HRGMv2_0301_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0301_5 HRGMv2_0301_5_154 207541 209520 - GH13_46
CAZyme HRGMv2_0301_5 HRGMv2_0301_5_155 209672 211681 - GH13_14
CAZyme HRGMv2_0301_5 HRGMv2_0301_5_156 211697 214390 - GH77
TC HRGMv2_0301_5 HRGMv2_0301_5_157 215050 216384 - 2.A.2.6.2
TF HRGMv2_0301_5 HRGMv2_0301_5_158 216666 217736 - LacI
TC HRGMv2_0301_5 HRGMv2_0301_5_159 217973 221038 + 1.B.14.6.1
TC HRGMv2_0301_5 HRGMv2_0301_5_160 221060 222691 + 8.A.46.1.1
pfam HRGMv2_0301_5 HRGMv2_0301_5_161 222970 224148 + SusE
pfam HRGMv2_0301_5 HRGMv2_0301_5_162 224231 225238 + SusF_SusE | SusF_N
CAZyme HRGMv2_0301_5 HRGMv2_0301_5_163 225475 227502 + GH13_7
Gene ID: HRGMv2_0301_5_154
Type: CAZyme
Location: 207541 - 209520 (-)
Gene ID: HRGMv2_0301_5_155
Type: CAZyme
Location: 209672 - 211681 (-)
Gene ID: HRGMv2_0301_5_156
Type: CAZyme
Location: 211697 - 214390 (-)
Gene ID: HRGMv2_0301_5_157
Type: TC
Location: 215050 - 216384 (-)
Gene ID: HRGMv2_0301_5_158
Type: TF
Location: 216666 - 217736 (-)
Gene ID: HRGMv2_0301_5_159
Type: TC
Location: 217973 - 221038 (+)
Gene ID: HRGMv2_0301_5_160
Type: TC
Location: 221060 - 222691 (+)
Gene ID: HRGMv2_0301_5_161
Type: pfam
Location: 222970 - 224148 (+)
Gene ID: HRGMv2_0301_5_162
Type: pfam
Location: 224231 - 225238 (+)
Gene ID: HRGMv2_0301_5_163
Type: CAZyme
Location: 225475 - 227502 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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