dbCAN Logo

Cluster: HRGMv2_0300_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0300_1 HRGMv2_0300_1_388 453922 455394 + 3.A.1.105.15
TC HRGMv2_0300_1 HRGMv2_0300_1_389 455419 456858 + 3.A.1.105.15
TC HRGMv2_0300_1 HRGMv2_0300_1_390 457075 458163 + 3.A.1.105.4
TC HRGMv2_0300_1 HRGMv2_0300_1_391 458369 458743 - 1.A.43.1.6
pfam HRGMv2_0300_1 HRGMv2_0300_1_392 458763 459080 - YbjQ_1
TC HRGMv2_0300_1 HRGMv2_0300_1_393 459222 460838 - 2.A.14.1.2
pfam HRGMv2_0300_1 HRGMv2_0300_1_394 461229 463874 + DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C
pfam HRGMv2_0300_1 HRGMv2_0300_1_395 463967 465190 + TPR_8
TC HRGMv2_0300_1 HRGMv2_0300_1_396 466190 467752 + 2.A.47.1.12
pfam HRGMv2_0300_1 HRGMv2_0300_1_397 468010 468894 + Acyl_transf_1
CAZyme HRGMv2_0300_1 HRGMv2_0300_1_398 469069 471207 + GH13_38
Gene ID: HRGMv2_0300_1_388
Type: TC
Location: 453922 - 455394 (+)
Gene ID: HRGMv2_0300_1_389
Type: TC
Location: 455419 - 456858 (+)
Gene ID: HRGMv2_0300_1_390
Type: TC
Location: 457075 - 458163 (+)
Gene ID: HRGMv2_0300_1_391
Type: TC
Location: 458369 - 458743 (-)
Gene ID: HRGMv2_0300_1_392
Type: pfam
Location: 458763 - 459080 (-)
Gene ID: HRGMv2_0300_1_393
Type: TC
Location: 459222 - 460838 (-)
Gene ID: HRGMv2_0300_1_394
Type: pfam
Location: 461229 - 463874 (+)
Gene ID: HRGMv2_0300_1_395
Type: pfam
Location: 463967 - 465190 (+)
Gene ID: HRGMv2_0300_1_396
Type: TC
Location: 466190 - 467752 (+)
Gene ID: HRGMv2_0300_1_397
Type: pfam
Location: 468010 - 468894 (+)
Gene ID: HRGMv2_0300_1_398
Type: CAZyme
Location: 469069 - 471207 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List