Cluster: HRGMv2_0300_CGC45
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0300
- CGC Family ID: CGCFAM_00604
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0300_23 | HRGMv2_0300_23_1 | 181 | 1152 | - | 3.A.2.1.7 |
| TC | HRGMv2_0300_23 | HRGMv2_0300_23_2 | 1187 | 2773 | - | 3.A.2.1.3 |
| pfam | HRGMv2_0300_23 | HRGMv2_0300_23_3 | 2779 | 3315 | - | OSCP |
| pfam | HRGMv2_0300_23 | HRGMv2_0300_23_4 | 3326 | 3844 | - | ATP-synt_B |
| TC | HRGMv2_0300_23 | HRGMv2_0300_23_5 | 3859 | 4095 | - | 3.A.2.1.6 |
| TC | HRGMv2_0300_23 | HRGMv2_0300_23_6 | 4194 | 5237 | - | 3.A.2.1.7 |
| NULL(UNKNOWN) | HRGMv2_0300_23 | HRGMv2_0300_23_7 | 5278 | 5685 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0300_23 | HRGMv2_0300_23_8 | 5688 | 5942 | - | ATP-synt_DE_N |
| TC | HRGMv2_0300_23 | HRGMv2_0300_23_9 | 5984 | 7510 | - | 3.A.2.1.7 |
| pfam | HRGMv2_0300_23 | HRGMv2_0300_23_10 | 7697 | 8674 | - | PFK |
| TC | HRGMv2_0300_23 | HRGMv2_0300_23_11 | 8731 | 10197 | - | 2.A.62.1.3 |
| pfam | HRGMv2_0300_23 | HRGMv2_0300_23_12 | 10358 | 11854 | - | Polysacc_synt | Polysacc_synt_3 |
| CAZyme | HRGMv2_0300_23 | HRGMv2_0300_23_13 | 11931 | 12821 | + | GT2 |
| CAZyme | HRGMv2_0300_23 | HRGMv2_0300_23_14 | 12773 | 13756 | + | GT2 |
Gene ID: HRGMv2_0300_23_1
Type: TC
Location: 181 - 1152 (-)
Type: TC
Location: 181 - 1152 (-)
Gene ID: HRGMv2_0300_23_2
Type: TC
Location: 1187 - 2773 (-)
Type: TC
Location: 1187 - 2773 (-)
Gene ID: HRGMv2_0300_23_3
Type: pfam
Location: 2779 - 3315 (-)
Type: pfam
Location: 2779 - 3315 (-)
Gene ID: HRGMv2_0300_23_4
Type: pfam
Location: 3326 - 3844 (-)
Type: pfam
Location: 3326 - 3844 (-)
Gene ID: HRGMv2_0300_23_5
Type: TC
Location: 3859 - 4095 (-)
Type: TC
Location: 3859 - 4095 (-)
Gene ID: HRGMv2_0300_23_6
Type: TC
Location: 4194 - 5237 (-)
Type: TC
Location: 4194 - 5237 (-)
Gene ID: HRGMv2_0300_23_7
Type:
Location: 5278 - 5685 (-)
Type:
Location: 5278 - 5685 (-)
Gene ID: HRGMv2_0300_23_8
Type: pfam
Location: 5688 - 5942 (-)
Type: pfam
Location: 5688 - 5942 (-)
Gene ID: HRGMv2_0300_23_9
Type: TC
Location: 5984 - 7510 (-)
Type: TC
Location: 5984 - 7510 (-)
Gene ID: HRGMv2_0300_23_10
Type: pfam
Location: 7697 - 8674 (-)
Type: pfam
Location: 7697 - 8674 (-)
Gene ID: HRGMv2_0300_23_11
Type: TC
Location: 8731 - 10197 (-)
Type: TC
Location: 8731 - 10197 (-)
Gene ID: HRGMv2_0300_23_12
Type: pfam
Location: 10358 - 11854 (-)
Type: pfam
Location: 10358 - 11854 (-)
Gene ID: HRGMv2_0300_23_13
Type: CAZyme
Location: 11931 - 12821 (+)
Type: CAZyme
Location: 11931 - 12821 (+)
Gene ID: HRGMv2_0300_23_14
Type: CAZyme
Location: 12773 - 13756 (+)
Type: CAZyme
Location: 12773 - 13756 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.