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Cluster: HRGMv2_0300_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0300_19 HRGMv2_0300_19_14 15245 17626 - CBM67 | GH78
CAZyme HRGMv2_0300_19 HRGMv2_0300_19_15 17655 19991 - GH3
CAZyme HRGMv2_0300_19 HRGMv2_0300_19_16 20005 21411 - GH5_25
NULL(UNKNOWN) HRGMv2_0300_19 HRGMv2_0300_19_17 21479 22612 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0300_19 HRGMv2_0300_19_18 22641 24413 - SusD_RagB | SusD-like_3
TC HRGMv2_0300_19 HRGMv2_0300_19_19 24432 27653 - 1.B.14.6.1
pfam HRGMv2_0300_19 HRGMv2_0300_19_20 27933 29663 + DUF6377 | DUF6377
CAZyme HRGMv2_0300_19 HRGMv2_0300_19_21 30151 32535 + GH3
CAZyme HRGMv2_0300_19 HRGMv2_0300_19_22 32543 34828 + GH3
CAZyme HRGMv2_0300_19 HRGMv2_0300_19_23 34836 37025 + GH3
Gene ID: HRGMv2_0300_19_14
Type: CAZyme
Location: 15245 - 17626 (-)
Gene ID: HRGMv2_0300_19_15
Type: CAZyme
Location: 17655 - 19991 (-)
Gene ID: HRGMv2_0300_19_16
Type: CAZyme
Location: 20005 - 21411 (-)
Gene ID: HRGMv2_0300_19_17
Type:
Location: 21479 - 22612 (-)
Gene ID: HRGMv2_0300_19_18
Type: pfam
Location: 22641 - 24413 (-)
Gene ID: HRGMv2_0300_19_19
Type: TC
Location: 24432 - 27653 (-)
Gene ID: HRGMv2_0300_19_20
Type: pfam
Location: 27933 - 29663 (+)
Gene ID: HRGMv2_0300_19_21
Type: CAZyme
Location: 30151 - 32535 (+)
Gene ID: HRGMv2_0300_19_22
Type: CAZyme
Location: 32543 - 34828 (+)
Gene ID: HRGMv2_0300_19_23
Type: CAZyme
Location: 34836 - 37025 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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