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Cluster: HRGMv2_0300_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0300_13 HRGMv2_0300_13_34 37544 38827 + GH5_7
TC HRGMv2_0300_13 HRGMv2_0300_13_35 38926 42132 + 1.B.14.6.1
pfam HRGMv2_0300_13 HRGMv2_0300_13_36 42149 43936 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) HRGMv2_0300_13 HRGMv2_0300_13_37 43964 45592 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0300_13 HRGMv2_0300_13_38 45614 47098 + GH5_4
CAZyme HRGMv2_0300_13 HRGMv2_0300_13_39 47273 48553 + CE7
CAZyme HRGMv2_0300_13 HRGMv2_0300_13_40 48550 49650 + GH26
CAZyme HRGMv2_0300_13 HRGMv2_0300_13_41 49686 50855 + GH130_1
TC HRGMv2_0300_13 HRGMv2_0300_13_42 50901 52277 + 2.A.2.3.6
Gene ID: HRGMv2_0300_13_34
Type: CAZyme
Location: 37544 - 38827 (+)
Gene ID: HRGMv2_0300_13_35
Type: TC
Location: 38926 - 42132 (+)
Gene ID: HRGMv2_0300_13_36
Type: pfam
Location: 42149 - 43936 (+)
Gene ID: HRGMv2_0300_13_37
Type:
Location: 43964 - 45592 (+)
Gene ID: HRGMv2_0300_13_38
Type: CAZyme
Location: 45614 - 47098 (+)
Gene ID: HRGMv2_0300_13_39
Type: CAZyme
Location: 47273 - 48553 (+)
Gene ID: HRGMv2_0300_13_40
Type: CAZyme
Location: 48550 - 49650 (+)
Gene ID: HRGMv2_0300_13_41
Type: CAZyme
Location: 49686 - 50855 (+)
Gene ID: HRGMv2_0300_13_42
Type: TC
Location: 50901 - 52277 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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