Cluster: HRGMv2_0300_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0300
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0300_1 | HRGMv2_0300_1_306 | 353810 | 356203 | + | 1.B.14.6.7 |
| NULL(UNKNOWN) | HRGMv2_0300_1 | HRGMv2_0300_1_307 | 356315 | 356704 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_0300_1 | HRGMv2_0300_1_308 | 356738 | 357610 | - | Sigma70_r2 | Sigma70_r3 | Sigma70_r4 |
| CAZyme | HRGMv2_0300_1 | HRGMv2_0300_1_309 | 357916 | 360495 | - | GH2 |
Gene ID: HRGMv2_0300_1_306
Type: TC
Location: 353810 - 356203 (+)
Type: TC
Location: 353810 - 356203 (+)
Gene ID: HRGMv2_0300_1_307
Type:
Location: 356315 - 356704 (+)
Type:
Location: 356315 - 356704 (+)
Gene ID: HRGMv2_0300_1_308
Type: STP
Location: 356738 - 357610 (-)
Type: STP
Location: 356738 - 357610 (-)
Gene ID: HRGMv2_0300_1_309
Type: CAZyme
Location: 357916 - 360495 (-)
Type: CAZyme
Location: 357916 - 360495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.