dbCAN Logo

Cluster: HRGMv2_0300_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0300_13 HRGMv2_0300_13_9 8207 10738 + 3.A.9.1.2
NULL(UNKNOWN) HRGMv2_0300_13 HRGMv2_0300_13_10 11120 11332 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0300_13 HRGMv2_0300_13_11 11468 11815 + 3.D.1.8.1
TC HRGMv2_0300_13 HRGMv2_0300_13_12 11806 12669 + 3.D.9.1.1
TC HRGMv2_0300_13 HRGMv2_0300_13_13 12682 14244 + 3.D.1.5.1
TC HRGMv2_0300_13 HRGMv2_0300_13_14 14247 15332 + 3.D.1.5.1
STP HRGMv2_0300_13 HRGMv2_0300_13_15 15345 15878 + Fer4
TC HRGMv2_0300_13 HRGMv2_0300_13_16 15883 16404 + 3.D.9.1.1
TC HRGMv2_0300_13 HRGMv2_0300_13_17 16401 16709 + 3.D.1.2.1
TC HRGMv2_0300_13 HRGMv2_0300_13_18 16715 18697 + 3.D.9.1.1
TC HRGMv2_0300_13 HRGMv2_0300_13_19 18727 20238 + 3.D.1.5.1
TC HRGMv2_0300_13 HRGMv2_0300_13_20 20260 21711 + 3.D.1.2.1
pfam HRGMv2_0300_13 HRGMv2_0300_13_21 21867 24728 - UvrA_DNA-bind | UvrA_inter
pfam HRGMv2_0300_13 HRGMv2_0300_13_22 24748 25458 - CHU_C
CAZyme HRGMv2_0300_13 HRGMv2_0300_13_23 25559 26929 + CBM50
Gene ID: HRGMv2_0300_13_9
Type: TC
Location: 8207 - 10738 (+)
Gene ID: HRGMv2_0300_13_10
Type:
Location: 11120 - 11332 (+)
Gene ID: HRGMv2_0300_13_11
Type: TC
Location: 11468 - 11815 (+)
Gene ID: HRGMv2_0300_13_12
Type: TC
Location: 11806 - 12669 (+)
Gene ID: HRGMv2_0300_13_13
Type: TC
Location: 12682 - 14244 (+)
Gene ID: HRGMv2_0300_13_14
Type: TC
Location: 14247 - 15332 (+)
Gene ID: HRGMv2_0300_13_15
Type: STP
Location: 15345 - 15878 (+)
Gene ID: HRGMv2_0300_13_16
Type: TC
Location: 15883 - 16404 (+)
Gene ID: HRGMv2_0300_13_17
Type: TC
Location: 16401 - 16709 (+)
Gene ID: HRGMv2_0300_13_18
Type: TC
Location: 16715 - 18697 (+)
Gene ID: HRGMv2_0300_13_19
Type: TC
Location: 18727 - 20238 (+)
Gene ID: HRGMv2_0300_13_20
Type: TC
Location: 20260 - 21711 (+)
Gene ID: HRGMv2_0300_13_21
Type: pfam
Location: 21867 - 24728 (-)
Gene ID: HRGMv2_0300_13_22
Type: pfam
Location: 24748 - 25458 (-)
Gene ID: HRGMv2_0300_13_23
Type: CAZyme
Location: 25559 - 26929 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List